Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq5832 122 8e-23 >seq5832 Length=3870 Score = 122 bits (134), Expect = 8e-23 Identities = 173/241 (72%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 58103 GGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATC-TCGATTACGT 58161 ||||| || |||| | || |||| ||||| || ||| | | ||| |||| | || Sbjct 1913 GGCTGCAAGCCGGGCATCGTGCTCAATCCGGCTACCCCGGTG-GACATCCTCGACTGGGT 1855 Query 58162 CATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTC 58221 |||| | ||||| || | ||||||||||| || ||||| |||||||| |||||| | Sbjct 1854 GCTGGATGACCTGGACCTGGTGCTGCTGATGTCGGTCAACCCGGGCTTCGGTGGCCAGGC 1795 Query 58222 TTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGCATTGATGCGTCCGG 58281 || ||||| | ||||||| || ||| | ||||| | || ||||| ||| Sbjct 1794 CTTCATTCCCTCGGCGCTGGAGAAGCTGAAAGTGGTGCGCAGGATGATCGATGCCAGCGG 1735 Query 58282 TTACGACATTCGCCTGGAAGTGGACGGCGGCGTGAAGGTGAACAATATCGGCGAGATCGC 58341 | ||||| |||||||| | |||||||||||||||| |||| |||||||||||||| Sbjct 1734 CAAGGACATCCGCCTGGAGATCGACGGCGGCGTGAAGGCCGACAACATCGGCGAGATCGC 1675 Query 58342 G 58342 | Sbjct 1674 G 1674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471170112649280