Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq10234 91.5 2e-13
>seq10234
Length=192330
Score = 91.5 bits (100), Expect = 2e-13
Identities = 235/352 (67%), Gaps = 12/352 (3%)
Strand=Plus/Plus
Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG---GGATAAAAATT 111132
||||||||||||||||| |||||| || || |||| | |||||||||||
Sbjct 2463 ACCAATAGGTCTGTGTCTTTGATTAGATGTTTTCG---TCTCTGGGATAGGATAAAAATT 2519
Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192
|||||||||| | |||||| ||| ||||| |||| || | | |||||| ||
Sbjct 2520 AACGTCAATGACTTTATCTAGATTGCGGGTGACAATTTTTGCGACTGTTTTAAGTTTATC 2579
Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252
| |||||||||| || ||| ||| ||| || | | || || ||||| |||||
Sbjct 2580 AAAATCAAAAGTCTTGGTATCTGTATTAACAAACATGTTGACAGCAATAGATGCTAAATT 2639
Query 111253 GCAAACAGC--CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
||| ||||| | |||| | | | | || || | |||||| ||||| | ||| |
Sbjct 2640 GCACACAGCAACTTCTC--CAGGACCAGAATATTCAACAATTTCAGTACACAGATTGCTA 2697
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG-TTGCACGCATCCTTGTAGAG 111369
| || || || || | || || || || | || | | || || ||| || || ||
Sbjct 2698 CATTTGATAGTGCCTATATGCTGGTGATT-CGATTTTCGATTACATTGATCTTTATAAAG 2756
Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACA 111421
||| || || || || ||||| || ||| ||||||| || |||| |||
Sbjct 2757 CATATAAGGTGTTCCAGTCTCTACTTGGGATCTGAGAATGGCGATCCATACA 2808
Score = 86.0 bits (94), Expect = 8e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728
||||| ||||||||||| || | | | |||| |||||| || | ||||| |||
Sbjct 1864 TTGACGATGACAAACTCTCCAGATAATACGCGCCTCACGTAGATATTGCTCGTGTACGGT 1923
Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788
|||| | |||| ||||| || || || ||||| || ||||| |||||||| ||||| ||
Sbjct 1924 TCAATGGATTCGTTATTCCCTAAAATCTGTGCCGTCGAGGCCGTTGGCATAGGTGCTATT 1983
Query 110789 AAAAG 110793
|||||
Sbjct 1984 AAAAG 1988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627936727545600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |