Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq11025 208 2e-48 seq7200 205 3e-47 seq9711 194 5e-44 seq6771 185 3e-41 seq10900 140 1e-27 seq10579 122 3e-22 seq9876 98.7 3e-15 seq11031 96.9 1e-14 seq10234 87.8 5e-12 >seq11025 Length=145197 Score = 208 bits (230), Expect = 2e-48 Identities = 804/1247 (64%), Gaps = 17/1247 (1%) Strand=Plus/Minus Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 |||| | ||||| | || || ||||| || || || ||| || |||| ||| Sbjct 18593 CTGACATGAAACACTGGCCATTCACTGTGGTG---AACGATGGTAGCAAGCCAAAGATTC 18537 Query 349497 AGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | || |||| ||||| || || || || || || || |||||| | || ||||| Sbjct 18536 AAGTACAATACAAAGGAGAGACGAAGACT-TTCTTCCCTGAAGAAGTGAGTTCGATGGTC 18478 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 |||| || |||||||| | ||| || || || ||||| |||| || || ||||||| Sbjct 18477 CTAGTAAAGATGAAGGAGACTGCGGAGGCGTACTTAGGCAAAACCGTCACCAATGCTGTG 18418 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || || || || || || || || || | |||||| ||||| || || ||||||| | Sbjct 18417 ATCACCGTCCCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACCAAGGACGCTGGCACC 18358 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || |||| || || || || | || || ||||| ||||||||||| || || || || Sbjct 18357 ATCTCGGGCTTGAACGTACTGCGTATCATCAATGAGCCCACTGCTGCCGCGATCGCCTAC 18298 Query 349736 GGGCTTGATAAAATGAGTGACC-AAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || |||| | | ||| || ||| | || || || ||| | |||||||| Sbjct 18297 GGTCTCGACAAAAAG-GCCACCGGCGAGCGAAACGTCCTCATCTTCGATCTCGGTGGTGG 18239 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||||| || || || | || || | ||||| || || || || || ||| | || || Sbjct 18238 CACTTTCGACGTGTCCATCCTGACGATCGAAGATGGTATCTTCGAGGTCAAATCCACAGC 18179 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||| |||||||| ||||| || || || || ||||| | || || || || | Sbjct 18178 GGGTGACACACATCTGGGTGGCGAGGACTTCGACAATCGCATGGTCAATCACTTCGTGCA 18119 Query 349915 AGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTA-GAGCAATGCGTCGC 349972 || || ||||| |||| || | ||| || | | | | | || | || || Sbjct 18118 GGAGTTCAAGCG-CAAGTACAAGAAGGAT-CTGACCACGAACAAACGCGCCCTCCGCCGT 18061 Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032 ||| | || || || || || || ||||| || | ||||| | || || || || Sbjct 18060 CTACGCACGGCCTGCGAGCGCGCGAAGCGGACCCTGTCATCCTCCACTCAGGCCAGCATC 18001 Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092 ||||| || || | || || | || || | | ||||| || || ||||| || Sbjct 18000 GAAATCGACTCGTTGTACGAGGGAATCGACTTTTACACCTCTATCACGCGAGCTCGTTTC 17941 Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152 || || | || ||||| || | | || | || || || || || | Sbjct 17940 GAGGAGCTCTGCGCCGATCTCTTCCGCGGTACTCTCGAACCCGTCGAGAAGTCGCTGCGC 17881 Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 || || || ||| ||| ||||||| | || | ||| ||||||| || || || || Sbjct 17880 GACGCCAAGATGGACAAGGCTCAGATTCACGATATCGTTCTAGTTGGCGGCTCCACGCGA 17821 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATC 350271 ||||| || |||| || | || || || || || |||||||| | | | || || Sbjct 17820 ATTCCCAAGATTCAGAAGCTCCTGCAGGACTTCTTCAACGGCAAAGAGCTCAACAAG-TC 17762 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || ||||| || ||||| || ||||| || ||||| || ||||| |||| | ||| Sbjct 17761 TATCAATCCCGACGAAGCCGTGGCATACGGCGCTGCCGTACAGGCGGCTATCCTGCATGG 17702 Query 350332 AAATAAGAGTTCTA--AAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTT 350389 | | ||| | | || | | || | | || || || || ||||| || || || Sbjct 17701 CGACA--AGTCCGAGGAAGTGCAGGACTTGCTTCTGCTTGACGTCACTCCGCTCTCTCTG 17644 Query 350390 GGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449 || | || || | || | || ||||| | || ||| || || | ||| | || Sbjct 17643 GGTATCGAGACAGCCGGCGGTGTCATGACCGCGCTCATTAAAAGGAACACTACCATCCCG 17584 Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509 |||||| || | || || || | || | || || |||||||| | || ||||| Sbjct 17583 ACAAAACAGACTCAGACCTTCACAACCTACGCCGACAATCAGCCCGGTGTGTTGATTCAG 17524 Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569 || | || || || || || || || || |||||| || || |||| || Sbjct 17523 GTGTACGAGGGCGAGCGCGCCATGACCAAGGACAATAATCTGCTGGGCAAATTCGAGCTT 17464 Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629 || | ||||| ||| ||| | ||||| ||||||||||| || | ||||| || ||| Sbjct 17463 AGCGGTATTCCCCCAGCGCCCCGCGGAGTCCCTCAGATTGAGGTTACATTCGACATCGAT 17404 Query 350630 TCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAA 350676 | || || || | || || | || || || || || | ||| || Sbjct 17403 GCGAACGGCATCCTTAACGTCTCTGCCGTGGACAAGTCCACTGGCAA 17357 >seq7200 Length=105881 Score = 205 bits (226), Expect = 3e-47 Identities = 187/236 (79%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| |||| ||||| | ||| | || || ||||||||||| || | Sbjct 105375 TTTGCATACCACCACGCAATCGGAGAACTAAATGCAACGTTGATTCTTTTTGAATGTTGT 105316 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | ||| || || || ||||||||||| ||||||||||| | | |||||||| Sbjct 105315 AATCAGAAAGTGTGCGACCGTCCTCAAGTTGTTTGCCAGCAAAGATCAATCTTTGCTGAT 105256 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||||||||| ||||| |||||||| ||||| || || || |||| || || | Sbjct 105255 CCGGAGGAATTCCTTCCTTATCTTGAATTTTTGCTTTGACGTTTTCGATCGTGTCCGAAG 105196 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| | ||| | || ||||| || || ||||| ||||||||||||||| Sbjct 105195 CCTCGACTTCCAATGTGATGGTTTTTCCTGTGAGAGTTTTGACAAAAATCTGCATT 105140 Score = 203 bits (224), Expect = 1e-46 Identities = 186/235 (79%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| || | ||||| | ||| | || || ||||| |||||||| | Sbjct 105831 TTTGCATACCACCACGCAAACGGAGAACCAAATGCAAGGTTGATTCTTTCTGAATATTGT 105772 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | ||| || |||||||| || |||||||| |||||||||| | || |||| Sbjct 105771 AGTCAGAAAGTGTACGACCATCTTCCAGCTGTTTTCCGGCAAAGATTAACCTCTGTTGAT 105712 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| |||||||| |||||||||||||| ||||| ||||| || |||| || |||| Sbjct 105711 CTGGAGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTTTCGATCGTGTCCGATG 105652 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| | ||||| |||||||| || | |||||| || ||||| ||||| Sbjct 105651 CCTCAACTTCCAATGTAATGGTCTTTCCAGTCAATGTTTTAACGAAAATTTGCAT 105597 Score = 194 bits (214), Expect = 5e-44 Identities = 182/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| || | ||||| | ||| | || || || ||||||||||||||||| Sbjct 105143 CATTCCACCACGCAAACGAAGAACCAAATGCAAGGTTGATTCCTTTTGAATATTATAATC 105084 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| |||||||||||||| | | |||||||| || Sbjct 105083 TGAGAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGG 105024 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||||||||| |||||||| ||||| ||||| ||||||| |||||| | || Sbjct 105023 TGGGATGCCTTCTTTATCTTGAATTTTCGCTTTGACATTCTCAATCGTATCAGAAGCCTC 104964 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || | |||||||| || || ||||| ||||||||||||||| Sbjct 104963 TACCTCCAAAGTGATGGTCTTTCCAGTCAGGGTTTTAACAAAAATCTGCATT 104912 Score = 187 bits (206), Expect = 8e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || |||||||||| ||||| | |||||||| || || ||||| ||||| || || Sbjct 104915 CATTCCGCCACGTAATCGAAGAACCAAGTGAAGAGTCGATTCCTTTTGGATATTGTAGTC 104856 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || || |||||||| ||||||||||||||||| | ||| ||||| ||||| Sbjct 104855 AGACAAGGTACGTCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGG 104796 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || |||||||| |||||||| || ||||| || || || || | ||||| | || Sbjct 104795 TGGGATGCCTTCTTTGTCCTGAATCTTTGCTTTCACGTTCTCGATAGTGTCAGAAGCCTC 104736 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || | |||||||| || | || || || ||||||||||| Sbjct 104735 AACCTCAAGAGTTATGGTCTTTCCAGTCAACGTCTTCACGAAAATCTGCAT 104685 Score = 172 bits (190), Expect = 2e-37 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| || | ||||| | ||| | || || ||||||||||| |||| Sbjct 105603 TTTGCATACCACCACGCAAACGGAGAACTAAATGCAACGTTGATTCTTTTTGAATGTTAT 105544 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || || || || || || ||||| || ||||| | | ||||||| Sbjct 105543 AATCTGAAAGCGTGCGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGAT 105484 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || |||||||| |||||||||||||| ||||| || || || |||| || || | Sbjct 105483 CCGGTGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCTGACG 105424 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || | ||| | |||||||| || | |||||| |||||||| ||||| Sbjct 105423 CTTCAACCTCCAATGTGATGGTCTTTCCCGTCAATGTTTTAACAAAAATTTGCAT 105369 >seq9711 Length=151070 Score = 194 bits (214), Expect = 5e-44 Identities = 184/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| || | ||||| | ||| | || || ||||| ||||| || | Sbjct 104026 TTTGCATACCACCACGCAAACGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGT 103967 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||| || |||||||| |||||||||||||| ||||||| | ||||||| Sbjct 103966 AGTCGGAAAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCGAAGATTAATCTCTGCTGAT 103907 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| |||||||| ||||| |||||||| ||||| ||||| ||||| | || || | Sbjct 103906 CCGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTGACATTTTCAATTGTGTCCGAAG 103847 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || | ||||| || || || || || ||||| |||||||||||||| Sbjct 103846 CTTCAACCTCCAATGTAATGGTTTTGCCAGTGAGAGTTTTAACAAAAATCTGCAT 103792 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | || | ||| | ||| ||||| || ||||| ||||| |||||||| Sbjct 104250 CATACCTCCACGAAGCCTCAAAACTAAATGCAGAGTGGATTCTTTCTGAATGTTATAATC 104191 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || ||||| || ||||| | | |||||||| || Sbjct 104190 TGAAAGCGTGCGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGG 104131 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| |||||||||||||| ||||| || || || |||| || || | ||| Sbjct 104130 TGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCTGACGCTTC 104071 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | ||| | |||||||| || | ||||| || ||||| ||||| Sbjct 104070 AACCTCCAATGTGATGGTCTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 104020 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || || |||||||||||||| || || || || ||||| || || Sbjct 104459 AGTACAAGGTGGAGTGTGGATTCTTTTTGAATATTGTAGTCGGACAAAGTTCGTCCGTCC 104400 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || |||||||| ||||| || || || | ||||||||| |||||||| || ||||| || Sbjct 104399 TCGAGTTGTTTGCCAGCGAAAATCAGTCTTTGCTGATCGGGAGGAATGCCCTCTTTGTCT 104340 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 |||||||| || || || || || || | || || | || || || ||||| | || Sbjct 104339 TGAATTTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCCTCGACCTCTAGTGTTATAGTT 104280 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||| || || ||||| |||||||| Sbjct 104279 TTGCCAGTTAAAGTCTTGACAAATATCTGCAT 104248 Score = 113 bits (124), Expect = 1e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || | || | ||| | ||||||||||| ||||| || || || Sbjct 103794 CATACCACCACGAAGCCTCAAGACCAAATGTAACGTAGACTCTTTCTGAATGTTGTAGTC 103735 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||| || |||||||| || |||||||| |||||||||| | || ||||| || Sbjct 103734 TGAAAGTGTACGACCATCTTCCAGCTGTTTTCCGGCAAAGATTAACCTCTGTTGATCTGG 103675 Query 140627 AGGAATTCCTTCTTTATCCT 140646 ||| |||||||| ||||||| Sbjct 103674 AGGGATTCCTTCCTTATCCT 103655 >seq6771 Length=7421 Score = 185 bits (204), Expect = 3e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| |||||||| ||||| || || || || ||||| || || | |||| |||||| Sbjct 306 AGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTATAGTCGGAAAGAGTTCTGCCATCT 247 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||||||||| |||||||| |||||||| |||||||| |||||||| |||||||| || Sbjct 246 TCAAGTTGTTTGCCAGCAAAAATTAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCT 187 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || |||||||| ||||| || || | || || | ||||||||| || || | || Sbjct 186 TGGATCTTAGCTTTGACATTCTCTATAGTGTCTGAAGCTTCAACTTCGAGGGTGATAGTT 127 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||||||| || |||||||| Sbjct 126 TTACCAGTGAGAGTTTTTACGAAGATCTGCAT 95 Score = 163 bits (180), Expect = 9e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 || || || || || ||||| || || ||||| || | || | ||||||||||| ||| Sbjct 525 TGGAGTGTTGATTCCTTTTGGATGTTGTAATCTGAAAGAGTCCTGCCATCTTCAAGCTGT 466 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||| || |||||||| || ||||| || |||||||| ||||| ||||| |||||| Sbjct 465 TTGCCAGCGAAAATTAGACGCTGTTGATCCGGGGGAATTCCCTCTTTGTCCTGGATTTTA 406 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||| || || || || | ||| || | |||||||||||| || | || || ||||| Sbjct 405 GCTTTCACGTTCTCTATAGTATCCGAAGCTTCAACTTCAAGGGTGATAGTTTTACCGGTG 346 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || |||||||| || |||||||| Sbjct 345 AGAGTTTTTACGAAGATCTGCAT 323 >seq10900 Length=227893 Score = 140 bits (154), Expect = 1e-27 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||||||||| || ||||| || | || || ||||| || |||||||| ||||| |||| Sbjct 197226 CTTTTTGAATGTTGTAATCTGAAAGGGTGCGTCCATCCTCTAGTTGTTTGCCAGCGAAGA 197285 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | || | |||||||| || ||||||||||| ||||||||||| ||||| || || || | Sbjct 197286 TGAGTCTCTGCTGATCCGGTGGAATTCCTTCCTTATCCTGAATCTTAGCCTTGACGTTCT 197345 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 | || | |||||| | || || || || || | ||||| || || || || || || | Sbjct 197346 CGATGGTATCAGAGGCCTCCACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGA 197405 Query 140728 AAATCTGCAT 140737 | |||||||| Sbjct 197406 AGATCTGCAT 197415 >seq10579 Length=342791 Score = 122 bits (134), Expect = 3e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 ||||||||||||| ||||| || |||||| |||||| |||||||||||||| Sbjct 110146 AAAATGAAGGAAACTGCTGCGGCTTATTTAAACACTTCAGTAAAAAATGCTGTTATTACT 110087 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || ||||| |||||||||||| | || || || |||||||||||||| ||||| Sbjct 110086 GTGCCAGCATATTTTAATGATTCACAACGACAAGCGACAAAAGATGCTGGTCAAATTGCT 110027 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || |||||||| || | | ||||| ||||| || || || ||| |||| || || | Sbjct 110026 GGATTAAATGTGCTTCGTGTAATTAACGAACCAACCGCAGCTGCACTTGCTTACGGCATG 109967 Query 349742 GATAA 349746 ||||| Sbjct 109966 GATAA 109962 >seq9876 Length=23795 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 ||||| || ||||||||||| || |||||||| || |||| ||| |||| |||||| ||| Sbjct 12414 CCTTCCTTGTCCTGAATTTTTGCCTTTACATTTTCGATCGTATCCGATGCTTCAACCTCA 12355 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | ||||| || || || ||||| ||||| |||||||| Sbjct 12354 AGGGTGATAGTCTTCCCCGTAAGAGTTTTCACAAAGATCTGCAT 12311 Score = 87.8 bits (96), Expect = 5e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 140534 ATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTG 140593 ||| | |||||| || |||||||| || || || || ||||| | |||||||| | ||| Sbjct 12932 ATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCCGACAATGTCCTGCCATCTTCCAATTG 12873 Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCT 140636 || ||||||||||| | | ||||||||| || ||||||||| Sbjct 12872 CTTGCCAGCAAAGATCAATCTTTGCTGATCTGGCGGAATTCCT 12830 >seq11031 Length=191090 Score = 96.9 bits (106), Expect = 1e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 130683 TTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTCATCATGTGCAGCTAACATTCCT 130742 |||| ||||| | ||| | || ||| || |||||||||| || | || |||||||| Sbjct 68080 TTTTTTCCATTCTTTTCTATAATTTCGCCGCCACATTCATCGTGGCCCGCAAACATTCCA 68021 Query 130743 CCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGATTTA 130802 || | |||||||||||| ||||| || ||||||||||| || | ||| |||||| | || Sbjct 68020 CCTACCATAACAAAATCCGCTCCAGCACCAAATGCTTTTGCTAAATCTCCGGGACAAGTA 67961 Query 130803 CAACCCCCATC 130813 || || || || Sbjct 67960 CACCCGCCGTC 67950 >seq10234 Length=192330 Score = 87.8 bits (96), Expect = 5e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 206689 GCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAAGTA 206748 || ||||||| || || | |||||| ||||||||| || ||||| |||| || || Sbjct 3603 GCGTTAAATAGTGTTGGTGAAGCATGCGTAAAATATCGTTCAGACAAATAATTGTACGTC 3662 Query 206749 GTTTTCACTTTTTCTAAATCATTTTCGTGTAAACAAATTGCTACACGTAACCACATATAT 206808 | | |||| || | ||||||||||| | || || || || | | | |||||| | Sbjct 3663 TCTATAGCTTTGTCAATGTCATTTTCGTGAATACCAACAGCCACTCTCATCAACATATGT 3722 Query 206809 TGAGGTCTTTCAATTAtttttttGTTAATGTGCATTAAATATGCACGCTCAAGAGTTTTA 206868 ||||| || |||| |||||| ||||| | || | ||| | ||| || |||||| Sbjct 3723 TGAGGCCTCTCAACTATTTTGCCATTAATTTTCAGCAGATAGCTTCTCTCGAGTGTTTTA 3782 Query 206869 AAGCCAAAATAAT 206881 || |||| ||||| Sbjct 3783 AAACCAATATAAT 3795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515018789305208