Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_028802.1 Length=49158 Score E Sequences producing significant alignments: (Bits) Value seq3805 87.8 6e-13 >seq3805 Length=3888 Score = 87.8 bits (96), Expect = 6e-13 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 4102 CAGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCTC 4161 ||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||| Sbjct 2181 CAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCT 2240 Query 4162 CCTGGC 4167 |||||| Sbjct 2241 CCTGGC 2246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157161347427840