Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_028832.1
Length=61511
Score E
Sequences producing significant alignments: (Bits) Value
seq8239 82.4 3e-11
seq3805 82.4 3e-11
>seq8239
Length=1603
Score = 82.4 bits (90), Expect = 3e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 54623 ATGCCCGACGCACATTTCGGCAAAGGCAGCTCGGTCGGCACAGTCATCCCCACCCAAGGC 54682
||||| |||| || | ||||| ||| | || ||| | || ||||| |||| ||
Sbjct 1492 ATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTGGGCTCGGTGATCCCGACCCGCGGT 1551
Query 54683 GCCGTCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATG 54727
|| |||||||||| || |||||||||||||||||||||||||||
Sbjct 1552 GCGATCATCCCGGCGGCGGTCGGCGTCGACATCGGCTGCGGCATG 1596
>seq3805
Length=3888
Score = 82.4 bits (90), Expect = 3e-11
Identities = 68/82 (83%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 784 CACATATGCGGGTAGCTCAATTCGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGT 843
||| || || ||||||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct 2172 CACGTACGCCAGTAGCTCAATT-GGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGT 2230
Query 844 TCGAGTCCTGCCCCGTGTGCCA 865
|||||||| || | ||||||
Sbjct 2231 TCGAGTCCCTCCTGGCGTGCCA 2252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 196685250619536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |