Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_028978.1
Length=60609
Score E
Sequences producing significant alignments: (Bits) Value
seq8239 89.7 2e-13
>seq8239
Length=1603
Score = 89.7 bits (98), Expect = 2e-13
Identities = 123/170 (72%), Gaps = 4/170 (2%)
Strand=Plus/Plus
Query 54896 CAGACGCTTGCGCAG--GCGCAGCAGATCGCCGATCTGCCTTTCGTCTATCCGCATGTGG 54953
||| ||| || |||| ||||| || |||||| | || |||||| ||| ||||
Sbjct 1429 CAGGCGCATGAGCAGCTGCGCAACA--TCGCCGCGATCCCGTTCGTCGGGCCGTGGGTGG 1486
Query 54954 CGCTGATGCCCGATGCGCATTTCGGCAAGGGCAGCAGTGTCGGCACGGTGATCCCGACCG 55013
| ||||||| || | ||| | ||||||||| | || ||| ||||||||||||||
Sbjct 1487 CCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTGGGCTCGGTGATCCCGACCC 1546
Query 55014 AGGGCGCCGTCATTCCCGCCGCGGTGGGTGTCGATATTGGCTGCGGCATG 55063
|| || |||| || || ||||| || ||||| || ||||||||||||
Sbjct 1547 GCGGTGCGATCATCCCGGCGGCGGTCGGCGTCGACATCGGCTGCGGCATG 1596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 193799266593072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |