Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq8239 107 1e-18 >seq8239 Length=1603 Score = 107 bits (118), Expect = 1e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 45297 CCGTTCATCCATCCGCACGTGGCGCTGATGCCGGATGCTCACAGCGGCAAGGGGTCCGCG 45356 |||||| || ||| ||||| |||||||||| | ||| |||||||| | | Sbjct 1465 CCGTTCGTCGGGCCGTGGGTGGCCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACC 1524 Query 45357 GTCGGCACTGTGATCCCGACCGTCGATGCGGTGATCCCCGCGGCGGTCGGCGTCGACATC 45416 || ||| | |||||||||||| || |||| | ||||| ||||||||||||||||||||| Sbjct 1525 GTGGGCTCGGTGATCCCGACCCGCGGTGCGATCATCCCGGCGGCGGTCGGCGTCGACATC 1584 Query 45417 GGCTGCGGCATG 45428 |||||||||||| Sbjct 1585 GGCTGCGGCATG 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299277328090448