Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq2842 132 7e-26 >seq2842 Length=3006 Score = 132 bits (146), Expect = 7e-26 Identities = 179/247 (72%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 99196 GAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAA 99255 ||||| ||||| || || |||||||||| | ||||| |||||||| ||| | Sbjct 1344 GAAGAGCGACCGCACCGGTACCGGTACCCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGA 1403 Query 99256 TCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTC 99314 || | |||||||| |||||||| || || ||| |||| ||| |||| ||||| || | Sbjct 1404 CCTCAACGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTG-CACCTGCGCTCGATCATCC 1462 Query 99315 ACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTG 99374 |||| ||||||||||||||||| ||||| ||||| || || | || || || | Sbjct 1463 ACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTGAAGGACAACCAGG 1522 Query 99375 TAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAAC 99434 | || |||||||| ||| || | ||||||||||||| ||||| ||||| | | Sbjct 1523 TGCGGATCTGGGACGAGTGGGCCGACGAGAATGGCGACCTCGGCCCGGTCTACGGCAGGC 1582 Query 99435 AGTGGCG 99441 ||||||| Sbjct 1583 AGTGGCG 1589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716355312411200