Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_031007.1
Length=223935
Score E
Sequences producing significant alignments: (Bits) Value
seq2842 132 7e-26
>seq2842
Length=3006
Score = 132 bits (146), Expect = 7e-26
Identities = 179/247 (72%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 99196 GAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAA 99255
||||| ||||| || || |||||||||| | ||||| |||||||| ||| |
Sbjct 1344 GAAGAGCGACCGCACCGGTACCGGTACCCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGA 1403
Query 99256 TCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTC 99314
|| | |||||||| |||||||| || || ||| |||| ||| |||| ||||| || |
Sbjct 1404 CCTCAACGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTG-CACCTGCGCTCGATCATCC 1462
Query 99315 ACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTG 99374
|||| ||||||||||||||||| ||||| ||||| || || | || || || |
Sbjct 1463 ACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTGAAGGACAACCAGG 1522
Query 99375 TAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAAC 99434
| || |||||||| ||| || | ||||||||||||| ||||| ||||| | |
Sbjct 1523 TGCGGATCTGGGACGAGTGGGCCGACGAGAATGGCGACCTCGGCCCGGTCTACGGCAGGC 1582
Query 99435 AGTGGCG 99441
|||||||
Sbjct 1583 AGTGGCG 1589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716355312411200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |