Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_031078.1
Length=50082
Score E
Sequences producing significant alignments: (Bits) Value
seq3733 176 1e-39
>seq3733
Length=4163
Score = 176 bits (194), Expect = 1e-39
Identities = 217/295 (74%), Gaps = 4/295 (1%)
Strand=Plus/Plus
Query 40115 CCCGTACTTCTCGGTGACGTACCTGATCACGTCGCCCCGTCGCCGGTCATC--GAAGTCG 40172
||||||||| | |||||| |||||| ||| | || || | ||| |||||||
Sbjct 2461 CCCGTACTTGCGTGCGACGTAGTCGATCACTTCGTCGCGGCG--GTCCATGCAGAAGTCG 2518
Query 40173 ATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCG 40232
||||| | ||||||||| |||||||| || || || ||||| |||||||| | || |
Sbjct 2519 ATGTCGAAGTCGGGCATCGACACGCGTTCCGGATTGAGGAAGCGCTCGAACAGCAGGTTG 2578
Query 40233 TGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACCGGCAGCC 40292
| ||| | ||||||||||| ||||| || | || ||||||||||||||| ||
Sbjct 2579 TACGGCAGCGGGTCCAGGTCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCC 2638
Query 40293 GAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCG 40352
|| ||||| ||||| |||| | | ||| | | |||| |||| ||||||||||||
Sbjct 2639 GAACCACGGCCGGGACCGATCGGGATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCC 2698
Query 40353 ACGACCAGGAAGTAGGACGGGAACCCCAGCTGGATGATCATGTCGATCTCGTACT 40407
|||| |||||||||| |||||| |||| || |||||| ||| || |||| |||
Sbjct 2699 ACGATCAGGAAGTAGCCCGGGAAGCCCATCTTGATGATGGTGTTGAGCTCGAACT 2753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160117721308608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |