Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq5857 86.0 7e-12 >seq5857 Length=3962 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 13605 CTTGGGCGATTAACTCAGCGGTAGAGTGCCTCCTTTACACGGAGTAGGTCGGGGGTTCGA 13664 || ||| | ||| ||||||||||||| | ||||||||||||||| |||||||||||||| Sbjct 3437 CTGGGGTGCTTAGCTCAGCGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGGGGTTCGA 3496 Query 13665 ATCCCTCATCGCCCA 13679 | |||||| | |||| Sbjct 3497 AACCCTCAGCACCCA 3511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557569803827520