Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq7037 82.4 6e-11 >seq7037 Length=35088 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||||||||| ||| | || ||||| || |||||| | || || || | Sbjct 23139 ATGCAGATATTTGTTAAGACCCTTACGGGCAAGACTATAACCCTAGAGGTTGAGCCATCT 23080 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| || | || ||| | ||||| || | || || || Sbjct 23079 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCGGATCAA 23020 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| ||||| | ||| || |||||| |||||||| | || || ||||| | Sbjct 23019 CAACGATTAATTTTTGCCGGAAAACAATTGGAAGATGGCCGAACATTGTCTGATTATAAT 22960 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||| ||| | || | ||||| || | || || || |||||| Sbjct 22959 ATTCAGAAGGAGTCTACTTTGCATTTGGTCCTGCGTTTACGTGGAGGT 22912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418199555635040