Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10186 627 1e-174 seq10162 383 2e-101 seq9684 95.1 2e-14 >seq10186 Length=270785 Score = 627 bits (694), Expect = 1e-174 Identities = 1522/2276 (67%), Gaps = 48/2276 (2%) Strand=Plus/Plus Query 78712 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 78771 |||| || || ||||||| | || || || || || |||| ||| ||||| ||||| Sbjct 27528 TCCACCGTAAACTGAATGGCATTGGCCGCAGGCTTTGTTCGTAAATAATACATGCCCGTC 27587 Query 78772 TTTAGACCGAGACT-CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || || || || || ||| |||||||| || || | ||| ||| | || || Sbjct 27588 TTGAGGCC-AGCCTTCCAGGAATAGAAATGTATGGAAGTCAATTTTCCGTAATTGGGTTC 27646 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 |||| || ||||| | |||||||| |||||||||||||| || | || || ||||| Sbjct 27647 GGCTACGTGTATATTAAACGATTGACTCTGATCGATGAAGGCCCCACGATCGGCGGCCAT 27706 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTT 78949 ||| ||| | ||||| | ||||||||||| ||||| |||| ||| | | | |||| Sbjct 27707 TTTGATGGTTGTCTTGACGGAAATTTCCCAAACGGTTTTGTAAAGCTCTCGGA-TCTCTT 27765 Query 78950 CTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 79006 |||| | | |||| || || || |||| | || ||| ||||||| || | Sbjct 27766 TGGGAATCTGTTCAATATTTTGTATAGAGCCACGGCTAGAAATGATCTTATTCTTCATAT 27825 Query 79007 CTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 79066 |||||| ||| || | ||||| ||| | | || | ||| |||| || | | || Sbjct 27826 CTTCATCCCACAAATCAAGTTCGGTCAAATCCTTGAGCAAATGGTGATTGACAATATTAA 27885 Query 79067 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCAT 79126 |||| || || | ||| | || ||||||||||| || || || || | ||||||| Sbjct 27886 ATTCACCTGAGAGTACACGACGTGTGTAAATATTCGATGTGTAGGGCTCAAATGATTCAT 27945 Query 79127 TATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTC 79186 |||| |||| ||| || || || || || || ||||| ||||| | | || || | Sbjct 27946 TATTACCCATAATCTGGGCTGTAGAAGCAGTAGGCATTGGTGCTAAGAGCAATGAGTTGC 28005 Query 79187 TAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG 79244 | ||| ||| | | ||||| | ||||| |||||||||| | || | || Sbjct 28006 GCACACC--ATGCTTGGCAATTTTGGCCTTTAGGTCAGCCCAATCCCACAAGTCGGTGGG 28063 Query 79245 GACAACATTCCAAAGATCATATTGTAGAATACCGTTACT---AGCG-TATGATCCTGTGT 79300 || |||||| | |||||| || |||||||| || || || | || || | | Sbjct 28064 TACTTTATTCCACATATCATACTGAAGAATACCTTTGCTTACAGGGCTA----CCGGGAT 28119 Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360 |||||||||| || || || || || || | ||||||||| ||||| || || || || | Sbjct 28120 ATGTTTCATAGGGACCATCTTTCTCAGCCAGTTCACAACTGGCCTCCAAGGCACCATAGT 28179 Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT--GCTTCTAGGCTATCAAATGGATA 79418 |||| ||||||||||| | || ||| || ||||| || | | || ||| | || || Sbjct 28180 AAATTGTTTCGAAAATTTGCTGATTAAG--CTTGTAGGCCTGTTCACTTTCATAGGGGTA 28237 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 | | ||||| | | ||| || || ||||| ||||||||||| || || | |||||| Sbjct 28238 ACGCATCAGAATTAGGGTGTCAGCGAAACCTTGTACACCAATACCAATGGGACGATGTCT 28297 Query 79479 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 | |||| || || ||||| || | ||||| || || || || || ||||||||||| Sbjct 28298 CATATTGGACTTTCTTGCTTCCGGCAATGGATAGTAGTTGATGTCAATGATTTTATTGAG 28357 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCAT-CTA 79597 ||| | | || ||| |||||| ||| | ||| |||||| | |||| | || Sbjct 28358 ATTGCGCGTAACAACCTTGGCCACATTCTTCAATTTCTTGAAATCATA-CGTCTTTTCTG 28416 Query 79598 ---TTACAAACATGTTCAACGCGACAGAT----GCCAGATTACAAACGGCTACCTCATTA 79650 | |||||||| || | |||| || |||| ||||||||| || | |||| | Sbjct 28417 GAGTCACAAACATATTGA----GACAAATCGAGGCCAAATTACAAACTGCAATTTCATCA 28472 Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710 | ||| || | | ||||| || || | || || || || || || || | |||| Sbjct 28473 GGTGCCGAGTACTCAACAATTTCTGTACACAAATTGCTGCATTTGATCGTGCCAATATTT 28532 Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770 |||||||||||||| || || || || || | || || | || || || ||||| Sbjct 28533 TGTTGATTACTCTTGCGATTGCAAGCGTCTTTGAACAGCATATAAGGGGTTCCTGTTTCC 28592 Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGACTTGTATCT 79829 | || | ||| || || || ||| | || || | || |||| | ||| | | Sbjct 28593 ACTTGGGCTTCGATGATGGCAAACCATAGCGCCT-GCGCTTTTACGGTCCTATTGGCTTT 28651 Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 ||| ||||||||| | || | | ||| || ||||||||||| ||||| | || Sbjct 28652 GCCTTCCTTTTCGTATTTTTCGTAAAGTTTTTCAAATTCGTCTCCCCACACATCTTGTAG 28711 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 || ||||||| || |||||||| | |||||| || |||| || | || || ||||| Sbjct 28712 CCCCGGACATTTGTGTGGACACATTAGCGACCAGTCGCCATTCTCTTCGACACGCTTCAT 28771 Query 79950 AAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 80008 ||| ||||| ||||||||||| || || ||| |||||||||| | |||||| || || | Sbjct 28772 AAACAGATCGGGAATCCAAAGGGCGTAGAAA-AGATCTCTGGCACGATGCTCTTCCTTGC 28830 Query 80009 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068 |||| || || || | ||| | ||| | | |||||| |||||||| |||||||| || | Sbjct 28831 CTGTGTTTTTCTTTAAATCCAAAAACTCAAAAATATCCGAATGCCATGGTTCCAAATAGA 28890 Query 80069 TGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 80128 |||| | | || || |||||| || || ||||| | || | || || || Sbjct 28891 TGGCAAATGCGCCAGGACGTTTGCCGCCACCTTGATCGACATAACGTGCAACATTGTTGA 28950 Query 80129 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 80188 | || || ||||| || | | |||||||||||| ||||| || |||| ||| | ||| Sbjct 28951 ATACCCTTAACATGGGCACTAAACCATTGGATGTGCCATTAGTGCCGGCAATAGAAGTTC 29010 Query 80189 CACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 | |||| || || | | |||||| || ||||| || ||| ||| || || | Sbjct 29011 CCTTGGCGCGTATACAATGGACATTGAT--GCCAATTCCTCCGGCCGATTTCGATATCAT 29068 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 ||||| ||| | | | | || || || || |||| | | |||| | || || Sbjct 29069 GGCGCACTGTTCAACAGACTTGAAAATACCTTCAATCGAATCAGCCACCATGGTCAGGAG 29128 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| |||| ||| | || | || | ||| ||||| || |||||||| || Sbjct 29129 GAAACAAGACGACAGCTGGGGGAGATTGGTGGCAGCAGCAAATAGAGTTGGAGAAGCATG 29188 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 ||||| | ||| || || | ||||| ||||| || || | || || || Sbjct 29189 AGTAAAGTAACGTTCCGAAAGCAAGTTGTAAGTCTCGATGGCAGCATCAATGTCTTCACC 29248 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 ||| || || || || |||||||| | |||||| ||||| || || | ||||| ||| Sbjct 29249 ATGTATGCCCACAGCCACACGCATGAGCATGTGTTGAGGCCTCTCCGCAATCTTTCCATT 29308 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 ||||||||||| || || ||||||| |||||||| |||||||| ||||| || || Sbjct 29309 CATTTTCAACAAATACGACCTTTCCAATGTTTTAAATCCAAAATAATTGTAACCGAAATC 29368 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 80606 || || |||| ||| |||| ||||| ||| || || | || |||| || | Sbjct 29369 ACGATCATAAACAATGGCCGAATTGAGGCGCTCCGAATTCTTCATTACCACAT-TATAAT 29427 Query 80607 GATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 80665 || ||| || || || || | || | || ||| | ||| ||| | |||| Sbjct 29428 GAAACTCCGATATCATGGGTGCCGGTCTGCCCGTTTCATCGCTAATATAATGATGCAAAT 29487 Query 80666 CCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTC 80725 | ||||| || || | || || |||||||| || ||||| ||||| || || | Sbjct 29488 CACTGATCACCTCGGAGAACACCTTCTTCGTTTCCTTATGAAGATTCGATACAGCAATAC 29547 Query 80726 TGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 80785 ||| || | | |||||||| | ||| | || || ||| || || |||| |||| Sbjct 29548 GGGCTGCCAGCAAAGCATAATCAGCATGATTAGTTGTTAGAGTAGCAGCCGTTTCCGCTG 29607 Query 80786 CCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 80845 ||| | | ||||||| | || || || ||| ||| | || | || ||| | | | Sbjct 29608 CCAAATTATCCAATTGTTGTGTGGTCACACCACAATACAAGCCATTAATGACCCTTAAGG 29667 Query 80846 CTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAG 80905 ||| || |||||| | | ||| | || |||||||| || | ||| || |||| Sbjct 29668 TTATGGCAACAGGATCGACAAAATCCATATTCAAGCCATAGCAAAGCTTTTGGATGCGAG 29727 Query 80906 ACGTGATTTTATCAAACATG-ACATTTTCCTTGTATCCATTTCGTTTAATGACAAA 80960 | ||||| || || || ||| || | ||||||| |||| ||| |||| ||||| Sbjct 29728 ATGTGATCTTGTCGAA-ATGTACCTCTTCCTTGCGACCATCTCGCTTAACCACAAA 29782 >seq10162 Length=1180275 Score = 383 bits (424), Expect = 2e-101 Identities = 595/841 (71%), Gaps = 22/841 (3%) Strand=Plus/Plus Query 49663 CCCATTTTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTTCCTTCCAAT 49719 ||||||||| ||||||||||||| ||| ||| || ||||| ||||| || |||||| Sbjct 71332 CCCATTTTT-GGTATTCACCCAC---TTTGCGTTCAAAGAAATTTGTTTTACCATCCAAT 71387 Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779 || || |||||||||| || ||||| | ||| || ||||| || ||||| Sbjct 71388 GAAATCATTTCCATGAAGGGGAAAGGATTTTTGGTATTGTAGATTTTGCCAACATCCAAT 71447 Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839 ||| | || | ||| || |||||||| |||||| ||| | ||||||||||||| Sbjct 71448 TCAACCAGCAGACGATCGGCAACAAATTCAATATATTCCGACATTAATTCACAATTCATT 71507 Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899 || || | ||| ||| ||||| |||| || ||||| |||||||| ||| |||||| Sbjct 71508 CCAATTAAATTACATGGCAGAGCTTCAGTTAGGAATTCCTGTTCAATTTTTACAGCATCT 71567 Query 49900 GTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAA 49959 || || ||| ||||| || ||| |||| | || ||| ||||||| Sbjct 71568 CGGATGATTTCAATAATACGTTCTTTGCTGGGTTTCTGCACCAGATATTTGAACATCAGT 71627 Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || |||| || ||||| | || | ||| ||||| || || | Sbjct 71628 ACGGCAAAATCACAATGCAAGCCTTCGTCACGCGAGATCAATTCATTGGAGAATGTCAAG 71687 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACC-CAGAAAAGA 50077 || |||||||| ||||| || ||||||||||| ||||| ||||| ||| | ||||| Sbjct 71688 CCAGGCATTAGACCACGTTTCTTAAGCCAAAAGATGGAGGCAAAACTACCGCTGAAAA-- 71745 Query 50078 AGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTC--ATG 50135 | || || || || || ||||| |||| || | |||||| || | || || ||| Sbjct 71746 ATATACCCTCAACGGCAGCAAACGCAATAACACGTTCTCCAAAATTAGCCGATTCTGATG 71805 Query 50136 TA-TCCACTTTTGA----GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 | |||| ||| ||||||||||||||||| || || ||||| ||||| ||| Sbjct 71806 AAATCCA----TGACAAGGCCCAATCGGCCTTCTTCTTAACGGCTGGCATTGTTTCAATG 71861 Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 50250 ||||| || ||||| | || || | || |||| || |||||||||| || |||| Sbjct 71862 GCATTGAAAAGATATTCACGTTGATCGCGGTCCTTAATGTATGTATCGATCAGAATACTA 71921 Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 |||||||| || |||| ||||| ||||| || || || || ||||| || | || || Sbjct 71922 TACATTTCGGAGTGAACATTTTCCATGGCAATTTGGAAGCCATAGAAGCAACGGGCTTCT 71981 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 || | ||||| ||| | || |||||| ||||||||||||| || || || ||| | Sbjct 71982 GTCACTTGCACCTCTTGCGAGAAACGTTCAACTAAATTTTCATTGACAATACCATCAGAG 72041 Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTC 50430 || || ||||| |||| ||||| ||| |||| ||| ||| ||||| | ||| | Sbjct 72042 GCGGCGAAAAAGGCCAGAACATGAGATATGAAATAGCGTTCATTGTCTGTTAATCTATCC 72101 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 |||||| | | ||||| || | ||| ||||||||||||||||||||||| ||||||||| Sbjct 72102 CAATCAGTTAAGTCTTTGGAGAGATCAACTTCTTCCACTGTCCAAAATGAAGCCTCTGCC 72161 Query 50491 T 50491 | Sbjct 72162 T 72162 >seq9684 Length=559441 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 44993 ACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAAT 45052 ||||| ||| || ||||| ||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct 346052 ACCCAGTTCTTTCACCTGCGTTAGAGATCTCCAGTCCATATTAGCACTTCCCAAATAAAA 346111 Query 45053 ATGTGTATTATCGGATATCCAAAATTTTGTATGAAGAACTCCTCC 45097 ||| | | ||| || ||||||||||| ||||| | ||||| || Sbjct 346112 ATGCCTGTGATCAGAAATCCAAAATTTAGTATGCAATACTCCGCC 346156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718084860338680