Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq9537 96.9 9e-17 >seq9537 Length=781016 Score = 96.9 bits (106), Expect = 9e-17 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||||||| ||||||||||| | | |||| |||||| || |||||||| ||||||| Sbjct 214110 ACCCCATGGCCCGAGTCTTTCCCAAAGTCACCAAATGTACATTCCACAAATATGGTCCTT 214169 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 | || || || | || | ||| || ||||| | || || ||| | |||||||||| Sbjct 214170 CCGGTTCGGTGCAGAAATTCGATGGTCTCTGTGTGCTGCCCCTCAACATTGTCAACGAGA 214229 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTT 3479 | ||||| | ||| | ||||||||||| Sbjct 214230 AAATCTATGTCTTCTTGTGGTTCTGGTT 214257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477203524500