Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq10820 95.1 1e-14 >seq10820 Length=150301 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 |||| || | ||| ||||| | ||||||||| || || ||| ||||||| || | || Sbjct 112183 TAGACATGTGTATCACCCAATGAGTGAATAAAATCGCCTGGTTTAAGACCTGTTATGTGG 112124 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 |||| |||||||||||| | | || ||| || || || ||||| |||| ||||| Sbjct 112123 GCAATCATATAAGTTAACAAAGCGTAAGAGGCGATATTGAATGGAACGCCCAGTCCCATA 112064 Query 20312 TC-TCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA-- 20368 || | | || | || |||||||||||| | ||| | | || |||||||||||| Sbjct 112063 TCAGCACTACGT-TGGGTCAGCTGACAGGACAATTCATCATTTGCCACATAAAATTGAGC 112005 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAA 20400 ||| |||| || || || || || ||||| || Sbjct 112004 CAT-ACAA-TGGCATGGTGGTAGAGCCATTAA 111975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441259769943080