Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq10186 111 3e-19 >seq10186 Length=270785 Score = 111 bits (122), Expect = 3e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 |||||||| ||||||||||| || | |||||| | ||| | ||| |||||||| ||| Sbjct 27528 TCCACCGTAAACTGAATGGCATTGGCCGCAGGCTTTGTTCGTAAATAATACATGCCCGTC 27587 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || ||||| || ||| || | || ||||||| || ||| | ||||| ||| Sbjct 27588 TTGAGGCCAGCCTTCCAGGAATAGAAATGTATGGAAGTCAATTTTCCGTAATTGGGTTCG 27647 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022 || | ||| || || | || || || || |||||||| | | | ||||| |||||||| Sbjct 27648 GCTACGTGTATATTAAACGATTGACTCTGATCGATGAAGGCCCCACGATCGGCGGCCATT 27707 Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||| | ||||| ||||| ||||| || || ||| Sbjct 27708 TTGATGGTTGTCTTGACGGAAATTTCCCAAACGGTTTTG 27746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794951570692720