Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq10993 100 3e-16 >seq10993 Length=153489 Score = 100 bits (110), Expect = 3e-16 Identities = 170/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 |||||||| ||||||| || || || || || ||||| ||||||| || | | | | Sbjct 65754 TGTCATGTCTTATGATCACCTATCCCTCAACTATGGGTGTGTTTGAAAGTACCGT--GGC 65697 Query 154924 AGATATGTA-AGA-TCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCT 154981 ||||| | || | | || | ||||||||||||| ||| | ||||| || || | Sbjct 65696 CGATATCTGCAGCCTTATACACAAATATGGTGGTCAGGTTTATTTGGATGGTGCCAACAT 65637 Query 154982 AAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAA 155041 ||||| ||||| || || || |||| ||||| ||||| | ||| | || Sbjct 65636 GAATGCCCAGGTGGGTCTTTGCCGCCCCGGTGATTATGGCAGTGATGTGTCCCATTTGAA 65577 Query 155042 CTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGG 155101 | || || || ||||||||||| ||||| ||||| ||||||||| | ||||| || || Sbjct 65576 TCTGCACAAGACTTTCTGTATTCCTCATGGTGGTGGTGGTCCTGGCATGGGTCCCATTGG 65517 Query 155102 TGT 155104 ||| Sbjct 65516 TGT 65514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579064470842080