Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq10993 134 2e-26 >seq10993 Length=153489 Score = 134 bits (148), Expect = 2e-26 Identities = 378/570 (66%), Gaps = 24/570 (4%) Strand=Plus/Minus Query 159222 ACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTA-TGTGATATCA 159280 |||| || ||||||||| |||| | | || || | | ||| || ||||| || | Sbjct 66071 ACAGGCCCAGGGTTATCATCAAATGTTCAAAGAATTGGA-AGATGATTTGTGTGAAATTA 66013 Query 159281 CAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGAC 159340 | || | |||| || || || ||||| ||| | ||| | ||||| || ||||| || Sbjct 66012 CGGGTTATGATAAAATCTCTTTCCAACCCAACTCGGGAGCCCAGGGAGAATATGCTGGTT 65953 Query 159341 TGTTAGCAATCCAAGCATACCATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTG 159399 || || || | |||||||| | | | | | || | | | | ||| | ||| | Sbjct 65952 TGAGGGCCATTCGTTCATACCATGA-GCAACGCAATGAGGGTCATCGCAATATCTGTCTT 65894 Query 159400 ATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTT 159459 || || || || ||||| || |||||||| || ||| ||||| || ||||||||| Sbjct 65893 ATTCCCATTTCGGCTCATGGCACCAATCCTGCCTCGGCACAAATGGCTGGCATGAAAGTT 65834 Query 159460 GTAGGTGTCAAGTGTGATGAT----GATGGCAACATAGACATCAAAGATCTAGAGAAGAA 159515 | | | | | || | ||||||| || ||||| |||| || | || Sbjct 65833 GAAC----CCATTCGCATTCTTAGCGATGGCAGTATTGACATGGCCCATCTGAAGGATAA 65778 Query 159516 AGCA----ATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACAC 159571 ||| | |||| ||| || |||||||| ||||||| || ||||| || || Sbjct 65777 GGCAGCGGAGCATGCCAACAATT----TGTCATGTCTTATGATCACCTATCCCTCAACTA 65722 Query 159572 ATGGTGTATTTGAAACAAACATCAGACAGATATGTA-AGA-TTGTTCATGAGAATGGTGG 159629 ||||| ||||||| | | | | | ||||| | || || | || | ||||||| Sbjct 65721 TGGGTGTGTTTGAAAGTACCGT--GGCCGATATCTGCAGCCTTATACACAAATATGGTGG 65664 Query 159630 TCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGA 159689 |||||| ||| | |||||||| || | ||||| ||||| ||||| || |||| Sbjct 65663 TCAGGTTTATTTGGATGGTGCCAACATGAATGCCCAGGTGGGTCTTTGCCGCCCCGGTGA 65604 Query 159690 CTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGG 159749 ||||| ||||| | ||| | || | || ||||| ||||||||||| ||||| || Sbjct 65603 TTATGGCAGTGATGTGTCCCATTTGAATCTGCACAAGACTTTCTGTATTCCTCATGGTGG 65544 Query 159750 TGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||| ||||||||| | ||||| |||||||| Sbjct 65543 TGGTGGTCCTGGCATGGGTCCCATTGGTGT 65514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587900607438320