Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq10186 109 3e-19 >seq10186 Length=270785 Score = 109 bits (120), Expect = 3e-19 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || |||||| | ||| |||||||| | || || || | |||||| || | ||||| Sbjct 28766 CTTCATAAACAGATCGGGAATCCAAAGGGCGTAGAAAAGATCTCTGGCACGATGCTCTTC 28825 Query 25990 TTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTA 26048 || || ||| || || |||| ||| || || ||||||||||| || ||||||||||| | Sbjct 28826 CTTGCCTGTGTTT-TTCTTTAAATCCAAAAACTCAAAAATATCCGAATGCCATGGTTCCA 28884 Query 26049 AATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 ||||||| ||||| || | ||| || ||||||||||| || || | |||| | Sbjct 28885 AATAGATGGCAAATGCGCCAGGACGTTTGCCGCCACCTTGATCGACATAACGTGCAACAT 28944 Query 26109 CATTGAAAACTTTCAACATTGGAACTAATCCA 26140 ||||| || | ||||| || ||||| ||| Sbjct 28945 TGTTGAATACCCTTAACATGGGCACTAAACCA 28976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252976819628525