Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq10820 105 5e-18 >seq10820 Length=150301 Score = 105 bits (116), Expect = 5e-18 Identities = 272/406 (67%), Gaps = 15/406 (4%) Strand=Plus/Minus Query 111720 GTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACC 111779 |||||||||||| ||||| | ||| || | | || || || || | || | | ||| Sbjct 112193 GTGATTTAAATAGACATGTGTATCACCCAATGAGTGAATAAAATCGCCTGGTTTAAGACC 112134 Query 111780 AGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACC 111839 || ||||| |||||||| || || | | | |||| || || || ||||| || || Sbjct 112133 TGTTATGTGGGCAATCATATAAGTTAACAAAGCGTAAGAGGCGATATTGAATGGAACGCC 112074 Query 111840 TAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATA 111899 || |||||||| | | ||| |||||||| || | || || | || |||||| Sbjct 112073 CAGTCCCATATCAGCACTACGTTGGGTCAGCTGACAGGACAATTCATCATTTGCCACATA 112014 Query 111900 AAATTGACAAAGTAC-ATGACAAGGAGGCAATGCCATCCCATTCATA----AAGGGTCCC 111954 ||||||| | ||| ||| || || || | ||||| || ||| ||||| | Sbjct 112013 AAATTGAGCCA-TACAATGGCATGGTGGTAGAGCCATTAAATGTATATCGCTAGGGT-TC 111956 Query 111955 CATGCACACATGATCATCCTTCTGCTGTAGCGAT-TATGTTCAATGTCGTGTATGACATT 112013 || || ||| || || | |||||| | | ||| | || | ||| ||| || ||||| Sbjct 111955 CAAGCGGTCATTATAATGCGTCTGCTATCGGGATCTGTGCGTATTGT-GTGGATTACATT 111897 Query 112014 CAAGAGCTGGTCTATCCCTTTACCAGTATAATCCGCCTGACATCCAGTG---TATGTTGC 112070 || |||||||| || | | |||||||| | | ||| |||| ||| |||| Sbjct 111896 TGCAAGTTGGTCTATTCCCTCATTGGTATAATCATCGTCACA---AGTGCGATATTTTGC 111840 Query 112071 CCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCC 112116 ||| | || | ||||||||||||||| | || |||||||| ||| Sbjct 111839 ACCAAAATGACGCCATTGGAATCCATATACCGGACCCAGATCGCCC 111794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391847736940381