Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq18266 98.7 1e-15 >seq18266 Length=950389 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| ||| ||| |||||||||||| | | ||| ||||||||||| Sbjct 753991 GTGAAAATATAACGAGCGCTAGCACAATCCTTGCCACCCGTTAAACGAGTACCGAATTGA 753932 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || || ||||| | | || | || || | |||||| ||||||| ||||| || ||| Sbjct 753931 CCTCTAGGCTCTAGCAAATTGATATTATTCGAACCCACATAGTTTTGGGCCAAATTAACA 753872 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || || ||| ||| ||||||| || || || || | | || || || | || Sbjct 753871 ATGGTCATTTGCAGGGATACCTCACCGTGATGGTAGGCAGACATTTCAGCAACCGAACCA 753812 Query 117485 GCCAGCTGAGCCACCTT 117501 | ||||| || ||||| Sbjct 753811 GAAAGCTGGGCAACCTT 753795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547075864822600