Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq9744 100 2e-16 >seq9744 Length=475756 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||||||||| || ||||||||||||||||||| | || | |||||| Sbjct 178556 ACCAAATGCAAAGTTGACTCCTTTTGAATATTGTAATCGGATAAGGTGCGGCCATCTTCT 178615 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 ||||||||||| || | || | | || |||||| ||| | ||||| || || Sbjct 178616 AATTGTTTGCCAGCGAAAATCAAACGCTGCTGGTCTGGGGGAATACCTTCCTTATCTTGG 178675 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| || |||| | | || |||| | | | ||| | |||||||||||| Sbjct 178676 ATTTTGGCCTTGACATTTTCAATGGTATCTGAAGGCTCTACTTCCAAGGTAATAGTTTTA 178735 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||||| || |||| |||||||||||| Sbjct 178736 CCTGTCAAAGTCTTAACGAAAATTTGCATT 178765 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||||||||| || ||||||||||||||||| | | || | |||||| Sbjct 179240 ACCAAATGCAAAGTTGACTCCTTTTGAATATTGTAATCAGATAAGGTGCGGCCATCTTCT 179299 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 ||||||||||| || | || | | || |||||| ||| | ||||| || || Sbjct 179300 AATTGTTTGCCAGCGAAAATCAAACGCTGCTGGTCTGGGGGAATACCTTCCTTATCTTGG 179359 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 |||||| || |||| | | || |||| | | | ||| | |||||||||||| Sbjct 179360 ATTTTTGCCTTGACATTTTCTATGGTATCTGATGGCTCTACTTCCAAGGTAATAGTTTTA 179419 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||||| || || | |||||||||||| Sbjct 179420 CCTGTCAAAGTCTTGACGAAAATTTGCATT 179449 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 || ||||| ||||||||||||||||||| || || | |||||| ||||||||||| Sbjct 177543 GTCGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGGCCATCTTCTAATTGTTTGCCA 177602 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 || | || | | ||||||||| ||| | ||||| || || ||||| || Sbjct 177603 GCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTGGCCTTG 177662 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | || |||| | | ||| | |||||||||||| || ||||| || Sbjct 177663 ACATTTTCTATGGTATCTGATGGCTCAACTTCCAAGGTAATAGTTTTACCTGTCAAAGTC 177722 Query 101222 TTAATAAAAATTTGCATT 101239 || | |||||||||||| Sbjct 177723 TTGACGAAAATTTGCATT 177740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409558513715133