Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq40 84.2 2e-11 >seq40 Length=47542 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || || ||||| |||||||||||| | |||||||| || || || ||| Sbjct 40204 AAAGTTAAACCTGGCATTAATCCTCGTTTCTTCATCCAAAATAATGCAGCAAAACTTCCA 40145 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || || |||||||| || |||| ||||| || | ||||| ||| | | ||||| | Sbjct 40144 GAGAAAAATATACCTTCAACGGCAGCAAATGCAACTAATCTTTCACCAAAAGTCGCTTTA 40085 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 | | | ||||| ||| | |||| || || |||| |||| || ||| ||||| Sbjct 40084 CTATCGCTTATCCACTTCAGAGCCCAATCTGCCTTTTTTTTTACACACGGCATGGTTTCA 40025 Query 17195 ATGGCCTTAAATAA 17208 || || |||||||| Sbjct 40024 ATAGCATTAAATAA 40011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517519593333600