Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1102 152 4e-32 >seq1102 Length=1235416 Score = 152 bits (168), Expect = 4e-32 Identities = 234/331 (71%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||||||||| || |||||| | || | | ||||| || ||||| ||||| || ||||| Sbjct 520332 AGTGACATGGGCTATCATGTATGTAAGTAATGAATAACTGGCAATATTAAAGGGTACTCC 520391 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 || ||||| |||||||||| ||| |||| |||||| || || | ||||||| |||| | Sbjct 520392 TAGACCCATGTCAGCTGATCGTTGGTACATTTGACACGACAGATATCCATCAGCGACAAA 520451 Query 101872 AAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930 ||| || || || | |||||| || || || |||||||||| | || | ||||| Sbjct 520452 AAACTGTACCAAACA-ATGACATGGTGGTAAGGCCATTTTAGGTACATCGCATGGATTCC 520510 Query 101931 AAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTT 101990 | ||| ||| | ||| | ||||| |||||| ||||| || |||| || | | || Sbjct 520511 ATGCAATCATAAGCATTCGCCTATCGTCAGGGTTAGTTTTAATTGTATTGATGACGTTTT 520570 Query 101991 TTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGA 102050 | || |||| |||| |||| ||||| ||| || |||||| || || Sbjct 520571 GAAGCTGATCAATACCTTTTCCTGAGTAATCTGTATGCACATCTACATATTCAGCACCAT 520630 Query 102051 AATGCCTCCACTGAAATCCATACACAGGTCC 102081 |||| | ||| ||||||||||| || || || Sbjct 520631 AATGACGCCATTGAAATCCATAAACTGGGCC 520661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361233500949020