Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1102 194 1e-44 >seq1102 Length=1235416 Score = 194 bits (214), Expect = 1e-44 Identities = 254/349 (73%), Gaps = 2/349 (1%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| || || ||||||||||||||| | |||| ||| ||||||||||| || Sbjct 520670 GGTGACTTGGGCCCAGTTTATGGATTTCAATGGCGTCATTATGGTGCTGAATATGTAGAT 520611 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 || | ||| |||| | ||| |||| | ||||| | ||||| || || ||| |||| Sbjct 520610 GTGCATACAGATTACTCAGGAAAAGGTATTGATCAGCTTCAAAACGTCATCAATACAATT 520551 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||||| ||||| |||| || |||| || | || ||||| | ||||| ||| Sbjct 520550 AAAACTAACCCTGACGATAGGCGAATGCTTATGATTGCATGGAATCCATGCGATGTACCT 520491 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATGAATT 20456 |||||| || || ||||||||| || | | || |||| || ||| || | | Sbjct 520490 AAAATGGCCTTACCACCATGTCAT-TGTTTGGTACAGTTTTTTGTCGCTGATGGATATCT 520432 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||||||||||||||| |||||||| ||||| ||||| || || || || || |||||||| Sbjct 520431 GTCGTGTCAAATGTACCAACGATCAGCTGACATGGGTCTAGGAGTACCCTTTAATATTGC 520372 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 |||||| | | ||||| || ||||| || ||||| || | |||||| Sbjct 520371 CAGTTATTCATTACTTACATACATGATAGCCCATGTCACTGGATTAAAA 520323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399164442478900