Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1102 114 3e-20 >seq1102 Length=1235416 Score = 114 bits (126), Expect = 3e-20 Identities = 216/306 (71%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || || ||||| || || || ||||| ||||||||||||| |||||||||||||| || Sbjct 520670 GGTGACTTGGGCCCAGTTTATGGATTTCAATGGCGTCATTATGGTGCTGAATATG-TAGA 520612 Query 35456 TGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCT 35514 ||| | | | ||||| | ||||| ||||||||||| | || | | || || | Sbjct 520611 TGTGCATACAGATTACTCAGGAAAAGGTATTGATCAGCTTCAAAACGTCATCAATACAAT 520552 Query 35515 GAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATG-GATCTTC 35573 | | || || || ||||| | ||| |||||| ||||||||||| ||| ||| | Sbjct 520551 TAAAACTAACCCTGACGATAGGCGAATGCTTATGATTGCATGGAATCC-ATGCGATGT-- 520495 Query 35574 ACCT--TATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATGGAG 35630 |||| ||||| | || ||||| || || || | || |||| ||| ||| ||||| Sbjct 520494 ACCTAAAATGGCCTTACCACCATGTCA-TTGTTTGGTACAGTTTTTTGTCGCTGATGGAT 520436 Query 35631 AATTGTCGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688 | ||||||| || |||| || ||| ||| || ||| || | || || ||||| || Sbjct 520435 ATCTGTCGTGTCAAATGTACCAACGATCAGCTGACATG--GGTCTAGGAGTACCCTTTAA 520378 Query 35689 TATTGC 35694 |||||| Sbjct 520377 TATTGC 520372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989533030239100