Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1102 96.9 5e-15 >seq1102 Length=1235416 Score = 96.9 bits (106), Expect = 5e-15 Identities = 223/328 (68%), Gaps = 6/328 (2%) Strand=Plus/Minus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGAG 70132 |||| ||||| || ||||| || ||| | || | || | | |||||||| ||| | Sbjct 520663 TGGGCCCAGTTTATGGATTTCAATGGCGTCATTATGGTGCTGAATATGTAGATGTGC-AT 520605 Query 70133 ACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACC 70192 ||||| || || || | ||| ||||||| | || | |||| | || | || || Sbjct 520604 ACAGATTACTCAGGAAAAGGTATTGATCAGCTTCAAAACGTCATCAATACAATTAAAACT 520545 Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCC-TGCAGATTTGCACCAAAT 70251 || || |||||| | || | ||| |||||||||| ||| ||| | | |||| Sbjct 520544 AACCCTGACGATAGGCGAATGCTTATGATTGCATGGAATCCATGC-GATGTACCTAAAAT 520486 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTAC-TCGTACGATGGCAAATTGTCAT 70310 ||| ||||||| ||||| ||||||| ||||||| ||| ||||| | |||| | Sbjct 520485 GGCCTTACCACCATGTCATTGTTTGGTACAGTTTTTTGTCGCT-GATGGATATCTGTCGT 520427 Query 70311 GCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCT 70370 | |||||| || | || |||||||| || || ||||||||||| ||||| || | Sbjct 520426 GTCAAATGTACCAACGATCAGCTGACATGGGTCTAGGAGTACCCTTTAATATTGCCAGTT 520367 Query 70371 ATTCTATGTTGACGCACATGATTGCTCA 70398 |||| | | || ||||||| || || Sbjct 520366 ATTCATTACTTACATACATGATAGCCCA 520339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741021961775200