Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2101 96.9 3e-15 >seq2101 Length=365754 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 108449 AGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGA 108508 ||||| ||| || | ||||| | ||| ||| | || || ||||||| | || ||| Sbjct 155599 AGAACGACATACCCGATTGGGTTCGCGACCACCGAGTGCATCACAAGTTCAGCGAGACGG 155658 Query 108509 CGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGA 108568 ||||||||||| |||||||||||||| |||| ||||||||||| || ||||| ||| Sbjct 155659 ACGCCGACCCACATAACGCCAACAGGGGTTTCTTCTTCTCGCACGTCGGTTGGCTGATGC 155718 Query 108569 TGACCAAGGACCCCGACGTGATCT-CGGCCGGTCGAAAA--ATGGACATGACGGACATAT 108625 | ||| ||||||| | ||| | | ||| || | || |||||| | || || Sbjct 155719 AGCGCAAACACCCCGA---GGTCTACAGACGGGGCAAGACCATCGACATGTCCGATATCG 155775 Query 108626 ACTCCGATCCGGTGGTAGTGTGGCACACCAAGT 108658 || |||||| |||| || |||||||||| Sbjct 155776 ACAACGATCCACTGGTGCAGTTTCACACCAAGT 155808 Score = 95.1 bits (104), Expect = 9e-15 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930 |||||| ||||| |||||||||||||||||||||||||||||| |||||| | ||| Sbjct 164397 GTGGCGCTTTTGGCGTTCGGCGAGGGATGGCACAACTACCACCACGCGTTCCCGTGGGAC 164338 Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957 |||||||| || ||| |||| ||| || Sbjct 164337 TACAAGGCGGCGGAGCTGGGCAACTAC 164311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381754095518880