Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq424 93.3 5e-14 >seq424 Length=602874 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 154957 AGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGT 155016 |||| || | |||||||| || | |||||||| || ||| | ||| |||| Sbjct 35495 AGGTTTACTTGGATGGAGCTAACATGAATGCACAAGTTGGATTGTGTCGACCTGGTGATA 35554 Query 155017 ATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTG 155076 ||| |||||||||| |||| |||| |||||||| ||||||||||| || ||||| || | Sbjct 35555 TTGGAGCAGATGTATCTCATTTAAATTTACATAAGACATTCTGTATACCTCATGGTGGCG 35614 Query 155077 GAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACAT 155114 | |||||||| | || || || | ||| | |||| || Sbjct 35615 GGGGTCCTGGGATGGGACCAATTGTTGT-GTAAAAAAT 35651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579183694556800