Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3666 111 1e-19 seq3604 95.1 8e-15 >seq3666 Length=820529 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||||||||| || |||||| |||||||| ||||| ||||| | ||| | || Sbjct 197504 CAAAACCAAGTGAAGGGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCGTC 197445 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || ||||||||||| || | ||||| |||||| | || | || || ||||| Sbjct 197444 TTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTC 197385 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || | | || || ||| | || || || | |||||||| Sbjct 197384 TTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCTACTTCCAATGTTATGGT 197325 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||| ||||| || ||||| |||||| Sbjct 197324 CTTTCCTGTGAGGGTCTTTACGAAGATTTGCATA 197291 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||||||||| || |||||| |||||||| ||||| ||||| | ||| | || Sbjct 197732 CAAAACCAAGTGAAGGGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCGTC 197673 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || ||||||||||| || | ||||| |||||| | || | || || ||||| Sbjct 197672 TTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTC 197613 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || | | || || ||| | || || || | |||||||| Sbjct 197612 TTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCTACTTCCAATGTTATGGT 197553 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||| ||||| || ||||| |||||| Sbjct 197552 CTTTCCTGTGAGGGTCTTTACGAAGATTTGCATA 197519 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||||||||| || |||||| |||||||| ||||| ||||| | ||| | || Sbjct 197960 CAAAACCAAGTGAAGGGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCGTC 197901 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || ||||||||||| || | ||||| |||||| | || | || || ||||| Sbjct 197900 TTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTC 197841 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || | | || || ||| | || || || | |||||||| Sbjct 197840 TTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCTACTTCCAATGTTATGGT 197781 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||| ||||| || ||||| |||||| Sbjct 197780 CTTTCCTGTGAGGGTCTTTACGAAGATTTGCATA 197747 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||| |||||||| ||||| ||||| | ||| | || Sbjct 197276 CAACACCAAGTGAAGGGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCGTC 197217 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || ||||||||||| || | || || || ||| | || | || |||||||| Sbjct 197216 TTCAAGTTGCTTTCCGGCAAAGATCAAACGCTGTTGATCTGGTGGGATACCTTCCTTGTC 197157 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 || || ||| || | | || || ||| | |||||| || | || || || Sbjct 197156 TTGGATTTTAGCTTTAACATTTTCAATGGAATCAGATGACTCAACTTCCAAAGTGATAGT 197097 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| || || | ||| || |||||||||||||| || Sbjct 197096 TTTACCAGTCAAAGTTTTGACAAAGATCTGCATGTT 197061 Score = 102 bits (112), Expect = 5e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || ||| ||||| ||||| ||||| ||||| | ||| | || Sbjct 198188 CAACACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGTCCGTC 198129 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || ||||||||||| || | ||||| |||||| | || | || || ||||| Sbjct 198128 TTCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTGTC 198069 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || | | || || ||| | || || || | |||||||| Sbjct 198068 TTGGATCTTGGCCTTAACATTTTCAATGGAATCAGATGATTCTACTTCCAATGTTATGGT 198009 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||| ||||| || ||||| |||||| Sbjct 198008 CTTTCCTGTGAGGGTCTTTACGAAGATTTGCATA 197975 >seq3604 Length=163256 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| ||| |||||||||||| || ||||| || | | || |||| ||| Sbjct 66358 ACTAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGATAATGTACGGCCATCTTCC 66417 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||||||||| || || | ||| || |||||| | || | || |||||||| Sbjct 66418 AATTGTTTTCCGGCGAAGATCAATCGCTGTTGGTCTGGTGGGATTCCTTCCTTGTCTTGG 66477 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||| || | | || || || | || || || | || |||||||| Sbjct 66478 ATTTTAGCTTTCACATTTTCAATAGAGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTG 66537 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || ||||| ||||||||||| ||||| || Sbjct 66538 CCAGTCAGAGTTTTCACAAAGATTTGCATCTT 66569 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| ||| |||||||||||| || ||||| || | | || |||| ||| Sbjct 65674 ACTAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGATAATGTACGGCCATCTTCC 65733 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||||||||| || || | ||| || |||||| | || | || |||||||| Sbjct 65734 AATTGTTTTCCGGCGAAGATCAATCGCTGTTGGTCTGGTGGGATTCCTTCCTTGTCTTGG 65793 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||| || | | || || || | || || || | || |||||||| Sbjct 65794 ATTTTAGCTTTCACATTTTCAATAGAGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTG 65853 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| |||||||| || ||||| Sbjct 65854 CCAGTAAGAGTTTTCACAAAAATTTGCAT 65882 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| ||| |||||||||||| || ||||| || | | || |||| ||| Sbjct 65902 ACTAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGATAATGTACGGCCATCTTCC 65961 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||||||||| || || | ||| || |||||| | || | || |||||||| Sbjct 65962 AATTGTTTTCCGGCGAAGATCAATCGCTGTTGGTCTGGTGGGATTCCTTCCTTGTCTTGG 66021 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||| || | | || || || | || || || | || |||||||| Sbjct 66022 ATTTTAGCTTTCACATTTTCAATAGAGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTG 66081 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| |||||||| || ||||| Sbjct 66082 CCAGTAAGAGTTTTCACAAAAATTTGCAT 66110 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| ||| |||||||||||| || ||||| || | | || |||| ||| Sbjct 66130 ACTAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGATAATGTACGGCCATCTTCC 66189 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||||||||| || || | ||| || |||||| | || | || |||||||| Sbjct 66190 AATTGTTTTCCGGCGAAGATCAATCGCTGTTGGTCTGGTGGGATTCCTTCCTTGTCTTGG 66249 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||| || | | || || || | || || || | || |||||||| Sbjct 66250 ATTTTAGCTTTCACATTTTCAATAGAGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTG 66309 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| |||||||| || ||||| Sbjct 66310 CCAGTAAGAGTTTTCACAAAAATTTGCAT 66338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324617694982560