Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3604 82.4 6e-11 >seq3604 Length=163256 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| | || || |||||||| || ||| ||| |||| Sbjct 65883 AATGCAAATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTGGAAGTAGAATCTTC 65824 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || | | | || | || |||||| ||||| || ||| | || ||| || Sbjct 65823 GGACTCTATTGAAAATGTGAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGACCA 65764 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||| || | ||||| || || ||||||||||||||| | | | ||| | || || Sbjct 65763 ACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGATGGCCGTACATTAT--CTGACTAC 65706 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || ||||| ||||||||||| || ||| | ||| Sbjct 65705 AATATTCAGAAAGAATCTACACTTCACTTAGTA 65673 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| | || || |||||||| || ||| ||| |||| Sbjct 66111 AATGCAAATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTGGAAGTAGAATCTTC 66052 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || | | | || | || |||||| ||||| || ||| | || ||| || Sbjct 66051 GGACTCTATTGAAAATGTGAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGACCA 65992 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||| || | ||||| || || ||||||||||||||| | | | ||| | || || Sbjct 65991 ACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGATGGCCGTACATTAT--CTGACTAC 65934 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || ||||| ||||||||||| || ||| | ||| Sbjct 65933 AATATTCAGAAAGAATCTACACTTCACTTAGTA 65901 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| | || || |||||||| || ||| ||| |||| Sbjct 66339 AATGCAAATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTGGAAGTAGAATCTTC 66280 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || | | | || | || |||||| ||||| || ||| | || ||| || Sbjct 66279 GGACTCTATTGAAAATGTGAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGACCA 66220 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||| || | ||||| || || ||||||||||||||| | | | ||| | || || Sbjct 66219 ACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGATGGCCGTACATTAT--CTGACTAC 66162 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || ||||| ||||||||||| || ||| | ||| Sbjct 66161 AATATTCAGAAAGAATCTACACTTCACTTAGTA 66129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425383957823580