Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq48 84.2 1e-11 >seq48 Length=686774 Score = 84.2 bits (92), Expect = 1e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25044 ATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATG 25103 |||| |||| ||| ||||||| | | ||||||||||||| | ||||| | || || | Sbjct 302943 ATAAATTTGTTGTGTATGGTTCTATAGATTCATTATTTCCAAGAATTTGTGCTGTTGAAG 303002 Query 25104 CTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTT 25163 | || ||||| ||||| ||| | |||||||| | |||| || | |||| | || Sbjct 303003 CCGTAGGCATCGGTGCTAATAACAATGAATTTCTAACTCCATGTTGAGCAATTTTCGCTT 303062 Query 25164 TTAATTTATCCCAATC 25179 ||||||||||||| || Sbjct 303063 TTAATTTATCCCAGTC 303078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253027602621500