Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq424 96.9 4e-15 >seq424 Length=602874 Score = 96.9 bits (106), Expect = 4e-15 Identities = 117/158 (74%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 138173 ATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAA 138232 || |||| | ||| |||| || || | |||||||| || || ||||| || |||||||| Sbjct 35651 ATTTTTTAC-ACAACAATTGGTCCCATCCCAGGACCCCCGCCACCATGAGGTATACAGAA 35593 Query 138233 TGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACC 138292 ||||||||||||||||| |||| |||||||||| ||| |||| ||| | || Sbjct 35592 TGTCTTATGTAAATTTAAATGAGATACATCTGCTCCAATATCACCAGGTCGACACAATCC 35533 Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCT 138330 || |||||||| | || || ||||| | || |||| Sbjct 35532 AACTTGTGCATTCATGTTAGCTCCATCCAAGTAAACCT 35495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578969305330400