Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1841 96.9 5e-15 >seq1841 Length=1115416 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAA 47904 || ||||||||| ||||||| |||||||| || | || | |||||||| | || | Sbjct 794953 TCAACATAATCTTTGGCATGACCCCAGTCCCGTTTAGAGTCTAAGTTTCCTAGTTGTATA 795012 Query 47905 CAGTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || || ||| | ||| | || || ||| ||||| || | ||||||||| Sbjct 795013 CAATCCAATGAACCAATTGCTATTTTTGCTACTGATCTGGTAATTTTTCTAGTTACAAAG 795072 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 |||| || | |||||| ||||| || || ||||| ||| | || |||||||| | Sbjct 795073 TTTTCTCCTCTCCTTGGACTCTCATGGTTGAACAGAATTCCATTGCAAGCATACATATTG 795132 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 || | |||||||||||| | || ||||| || |||| | ||| ||| Sbjct 795133 TAGGCTTCACGATAGTTTGTCACAATCCAATAAGCATATAATTTGGCA 795180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665460958906400