Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2154 118 2e-21 seq3866 89.7 8e-13 >seq2154 Length=352369 Score = 118 bits (130), Expect = 2e-21 Identities = 165/228 (72%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | ||||| | || || || |||| || | | || | || ||| | Sbjct 250910 TGCAAATTTTTGTTAAAACCCTTACGGGTAAGACAAGTATTCTCGAGATTGAGTCATCA- 250852 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||| ||||| ||||| ||||| ||||| || ||||||||||||||| || |||||| Sbjct 250851 GATTCTATTGAAAATTTAAAATCGAAAATCTAAGATAAAGAAGGCATTCCCCCGGATCAA 250792 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| || |||||||| || || ||||| || ||| | | || ||| | ||||| ||| Sbjct 250791 CAACCTCTAATTTTTGCTGGCAAGCAATTGGAAGATGGTCGTACATTATCTGATTACAAT 250732 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 |||| | || || ||| | || |||||| | || |||||||| ||| Sbjct 250731 ATAC---AGGAGTCAACTCTTCACTTAGTACTTCGTTTAAGAGGTGGT 250687 >seq3866 Length=782398 Score = 89.7 bits (98), Expect = 8e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| | ||||| || || || || |||| || || | | Sbjct 247800 TGCAAATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTTGAGGTCGAGTCTTCTG 247859 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| ||| |||||| ||| ||||||||| || ||||||||||||| Sbjct 247860 ACACTATCGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAAC 247919 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || || || || | || ||| | || || | |||||||| | Sbjct 247920 AACGTTTGATCTTCGCCGGCAAGCAGCTTGAAGATGGACGTACTTTGTCGGATTATAACA 247979 Query 146212 TACAAAA 146218 | ||||| Sbjct 247980 TCCAAAA 247986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786126895138400