Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq3263 131 3e-25 >seq3263 Length=267844 Score = 131 bits (144), Expect = 3e-25 Identities = 216/309 (70%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 182998 GAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAA 183057 |||||| || |||||||| ||| |||||| | ||||||||||| || | | ||| Sbjct 108135 GAAAAGTCACGCACACATGATGATCTGTGGAATTCTGCACAAATACAGTTGGTAAAGGAA 108194 Query 183058 GGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGA 183117 || || ||||| |||| | || ||||||||||||||||||||||| |||||||| Sbjct 108195 GGCAAGATGCACGGTTTCCTTCGCATGTACTGGGCTAAAAAGATACTGGAATGGACTGAT 108254 Query 183118 ACTCCGGA-AGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGG 183176 ||||| || ||| || || || || ||| | || | ||||| | ||||| Sbjct 108255 ACTCCAGATAGA-GCACTGGCCGATGCCATTTATCTCAATGACAAGTATAGCATGGACGG 108313 Query 183177 TACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGC 183236 | || || | || | || || ||||||||||| || || || | || ||| | Sbjct 108314 TCGCGACCCAAGTGGTTTTGTTGGATGTATGTGGTCAATATGTGGTATTCATGATCAGGG 108373 Query 183237 GTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAA 183296 ||||| ||||||| || |||||||| || || |||||||| ||||| | | |||| Sbjct 108374 GTGGAGAGAAAGAGAAATTTTTGGAAAAATTAGGTATATGAACTATGAAGGATGCAAGAG 108433 Query 183297 GAAATTTGA 183305 || ||||| Sbjct 108434 AAAGTTTGA 108442 Score = 93.3 bits (102), Expect = 8e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 182414 TTATACAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAAT 182473 ||||||||||||| || || ||||| ||||||||||||| ||| ||||||||| |||||| Sbjct 107272 TTATACAGGTAGATGCCCATAATATTGTACCTTGTTGGGTAGCCTCTGACAAACAAGAAT 107331 Query 182474 ACGGTGCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAAT 182533 | ||||||||| || |||| || || | | || ||| || | | | ||||||| Sbjct 107332 ATTCTGCAAGAACAATACGAAACAAAATCAATAACAAATTACCCGAGTTTTTAACAGAAT 107391 Query 182534 TTCC 182537 | || Sbjct 107392 TCCC 107395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903365803587200