Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2031 86.0 1e-11 >seq2031 Length=371356 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 304946 CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGT 305005 |||| ||||| | |||| |||| | |||| ||| | ||||||||||| || | Sbjct 13284 CAAAAGTCTGGTAAACCTCTAAAAGCAATTAAAGCACGGTTGAAAGGTAAAGAAGGAAGA 13343 Query 305006 ATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCT 305065 |||||||| ||| | ||||||||||| || |||||| ||| ||| |||||| || ||| Sbjct 13344 ATTCGAGGAAATTTGATGGGAAAACGGGTAGATTTTTCTGCTCGAACTGTAATTACTCCT 13403 Query 305066 GATTCTCAAATT--AGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAA 305123 ||| |||||| || || | ||| | || || || | |||||| ||| | | Sbjct 13404 GAT--CCAAATTTGAGAATTGACGAAGTTGGTGTACCTCGTACTATTGCTCAAAATATGA 13461 Query 305124 CATTTCCAGAGAAAGTTA 305141 | ||||| |||| |||| Sbjct 13462 CGTTTCCTGAGATTGTTA 13479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186751671723220