Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1079 113 6e-19 seq1207 93.3 6e-13 >seq1079 Length=469167 Score = 113 bits (124), Expect = 6e-19 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||| || |||||||| || ||||||||| |||| | | | || || || | || Sbjct 8071 ATCTATAAAGTGCTCAAACAAGTGCACCCCGACACCG--GCGTC-TCGTCAAA---GGCC 8018 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||| | |||| ||||||| | |||||||||| Sbjct 8017 ATGAGCATCATGAACAGCTTCGTCAACGACCTTTTCGAGCGCATCGCCGGCGAGGCCGGT 7958 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||||| | | |||||| | | ||| | | | ||||||||||| ||||| Sbjct 7957 CGCCTGGTCCAATACAACAATGGTAGGACGTTAACTAGTAGAGAGATCCAGACGGCCGTC 7898 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| ||||||| |||||| || ||||| ||| ||||||| Sbjct 7897 CGCCTTTTGTTGCCCGGCGAATTGGCCAAACATGCCGTAAGCGAAGGCACCA 7846 >seq1207 Length=1223737 Score = 93.3 bits (102), Expect = 6e-13 Identities = 173/249 (69%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTA--TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGC 724953 |||||||| | |||| | ||||| || || || || || |||||| |||| | | Sbjct 771967 TCGTACTC--CGTTTACATTTACAAAGTACTGAAACAAGTACACCCCGACACCG--GCGT 772022 Query 724954 CATCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCA 725013 | || || || | ||||| ||||||||| || |||||||| || |||| |||| Sbjct 772023 C-TCTTCGAA---GGCCATGAGCATCATGAACAGCTTCATCAACGACCTGTTCGAGCGCA 772078 Query 725014 TCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCG 725073 ||| ||| || | |||| |||| | || ||||||||| || ||| || || | Sbjct 772079 TCGCCACTGAATCTAGTCGTCTGGTCCACTACAACAAGCGTTCGACCATCACCAGCCGGG 772138 Query 725074 AGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG 725133 | |||||||||||||| || || | ||| || ||| |||||| ||||||||| | Sbjct 772139 AAATCCAGACCGCCGTCCGACTCTTGTTGCCTGGAGAATTGGCCAAACACGCCGTCAGTG 772198 Query 725134 AGGGCACCA 725142 | || |||| Sbjct 772199 AAGGAACCA 772207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177423463611240