Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq3578 87.8 8e-13 >seq3578 Length=852544 Score = 87.8 bits (96), Expect = 8e-13 Identities = 129/178 (72%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149 || ||||||||||| | || ||| ||||| || ||||| |||| | |||| || Sbjct 803470 GTACCAAACTGACCTATGGGTTGTAACAAATTTATGTTGTTACTTCCAACATAATTTTGT 803411 Query 65150 GCCA--TTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTT 65207 || | ||| | ||||| || | ||| | |||| |||||||||||| ||||||| | Sbjct 803410 GCTAAATTC--ACAATTGTTGACATCAAAGACACTTCGCCGTGATGATATGCTGAATGCT 803353 Query 65208 CAGAGACATATCCACTAAATTGAGCAACTTTTATTTC-CGTTGTTAAATTCTTTTTAA 65264 ||| ||| | ||| |||||||||||||| ||||| |||| | |||| |||||| Sbjct 803352 CAGCTACAGAACCAGCTAATTGAGCAACTTTAATTTCACGTT-TATCATTCCTTTTAA 803296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235668453153000