Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1536 86.0 8e-12 >seq1536 Length=414100 Score = 86.0 bits (94), Expect = 8e-12 Identities = 177/261 (68%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 89153 TATTTACACCGATTCAGACGAATGGTTTACATGGAAAGAATTATTC-GATCCTGTCTTGC 89211 ||||||||| ||| | | |||||| | | |||| | | | | |||||||| |||| Sbjct 106650 TATTTACACTGATCAAAATGAATGGGATGCCTGGACA-ACTCGTGGAGATCCTGTTTTGC 106708 Query 89212 ATATAGAACTTAGGAGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTC 89271 ||||||||||| | || || |||| | | || || | | |||||||| Sbjct 106709 ATATAGAACTTTCAAAAAAAGCAGACTTATTAGTGCTTGCTCCTTTGAGTGCTAATACCA 106768 Query 89272 TAGCGAAGATAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGG 89331 | || || | || || ||||| ||||||||| |||| | | ||||| || ||| Sbjct 106769 TGGCTAAAGTGAGTACAGGAATATGTGACAACTTATTAACATGCGTTGTTAGAGCTTGGA 106828 Query 89332 ATATATCAAAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTA 89391 || | |||||||| | | |||||||| | |||||||||| ||||||| | ||||| Sbjct 106829 ATGTTTCAAAGCCAGTATTGTTTTGTCCATCAATGAATACTCAAATGTGGAATCATCCAG 106888 Query 89392 TTACTGAATCACAAATAGATA 89412 | ||| || ||| | |||| Sbjct 106889 TAACTAAAGATCAAGTGGATA 106909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603150490164800