Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq40 145 7e-30 >seq40 Length=47542 Score = 145 bits (160), Expect = 7e-30 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 4787 AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846 |||| ||| | ||||| |||||| ||||| || || || |||| || |||||||| Sbjct 39944 AAATTATTAATACTTTTCTTTTGGGTCCTGAATGTATGTATCAATTAATAAACTATACAT 39885 Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTAC 4906 ||| ||||||||||| || || || ||||| || ||||| |||||||| || || || Sbjct 39884 TTCTGAATGTATATTCTCCATCATTATTTGAAACCCATAAAAACATCTAGCCTCCGTCAC 39825 Query 4907 TTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGC 4966 ||||||||| | | |||||| ||| || | ||||| || || ||||| || || || Sbjct 39824 TTGAACTTCTTGAGAAAATCGTTCAACAAGATTTTCATTGACAATACCATCTGAAGCAGC 39765 Query 4967 AAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCA 5006 |||||| || || || || |||||||||| |||| ||| Sbjct 39764 AAAAAATGCTAATACGTGGGATATAAAGTGACGTTCATCA 39725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427028677238660