Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq40 163 3e-35 >seq40 Length=47542 Score = 163 bits (180), Expect = 3e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || ||||||||||||| ||||||||||||||| ||||| ||||| || || || ||| Sbjct 39913 ATGTATGTATCAATTAATAAACTATACATTTCTGAATGTATATTCTCCATCATTATTTGA 39854 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 |||||||||||||||||||| || | || |||||| || | | |||||| || | | | | Sbjct 39853 AACCCATAAAAACATCTAGCCTCCGTCACTTGAACTTCTTGAGAAAATCGTTCAACAAGA 39794 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| || ||||||||||| ||||||||| || || | || | |||||| || Sbjct 39793 TTTTCATTGACAATACCATCTGAAGCAGCAAAAAATGCTAATACGTGGGATATAAAGTGA 39734 Query 23959 CTTTCATCAGTTGATAATTTTTTCCAATCATTAATATC 23996 | ||||||| | ||| | |||||||||| || ||| Sbjct 39733 CGTTCATCATCAGTCAATCTATTCCAATCATCAAGATC 39696 Score = 131 bits (144), Expect = 2e-25 Identities = 166/227 (73%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||| ||||| ||||| || ||||| |||||||||||||||||||| || Sbjct 40231 TCATCTCTAGAAATCAGCTCATTGCTGAAAGTTAAACCTGGCATTAATCCTCGTTTCTTC 40172 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 |||||||||| ||||||||| ||| || || || ||||| ||||| || ||||| || Sbjct 40171 ATCCAAAATAATGCAGCAAAACTTCCAGAGAAAAATATACCTTCAACGGCAGCAAATGCA 40112 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 || | | | |||||| || || ||| ||| ||||| || | ||||| ||| Sbjct 40111 ACTAATCTTTCACCAAAAGTCGCTTTACTATCGCTTATCCACTTCAGAGCCCAATCTGCC 40052 Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 || |||||||||| || |||||||| || || || | |||||| Sbjct 40051 TTTTTTTTTACACACGGCATGGTTTCAATAGCATTAAATA-AAAAGT 40006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521461795228000