Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2053 91.5 2e-13 >seq2053 Length=1098109 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/231 (69%), Gaps = 13/231 (6%) Strand=Plus/Plus Query 155915 TATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTT 155974 |||||| | ||| | || |||||||||| ||| ||||||||||| | ||| ||| || Sbjct 894791 TATCTT-ACTTCAAGTCGGCCAGGTCTTAGTAACGCTTCGTCAATCATGTCTCTTCTATT 894849 Query 155975 GGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAA 156034 |||||||| || | ||| ||||| |||| || || || || ||||||| || || Sbjct 894850 AGTCATACCAATAACTAAGATGTTATTTAGTTGCTCAACTCCATCAATTTTAGCTAACAA 894909 Query 156035 TTGATTGACTACGGCGTCGTG----CGTGGCGTT--------ATCACCGCGTTTTTTACA 156082 ||||| || || | |||||| | || || | ||| | | |||||| Sbjct 894910 CTGATTAACCACAGTGTCGTGCACTCCTGTATTTCCTCCAACAGAACCTCTTGCTTTACA 894969 Query 156083 CAGAGCATCTATTTCATCGAAGACGATAACGTGTAATCCGCTGGCTAAACC 156133 | |||||| |||||||| |||| ||| | || || || || ||| |||| Sbjct 894970 AATAGCATCAATTTCATCAAAGATGATTATATGCAAGCCACTAGCTGAACC 895020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667041679471200