Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq4696 194 2e-44 seq1332 122 1e-22 seq4429 84.2 3e-11 >seq4696 Length=9412112 Score = 194 bits (214), Expect = 2e-44 Identities = 318/456 (70%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||| || ||||||||||||| |||||||||||||||| |||||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || | | ||| || |||| ||||| || | || || ||||| | ||| ||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 482046 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 || ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | | Sbjct 482047 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 482106 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 || |||| ||||||||||||||| || |||| | ||||||| | |||||||| || Sbjct 482107 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 482166 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||||| | ||| | || |||||||| || ||||| | ||| |||| | |||||| || Sbjct 482167 TTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 482226 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309 | | || || || || || || | ||| |||| | ||| | || | ||| Sbjct 482227 TACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 482286 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || || ||| || ||| || |||| || | |||||||| || || || Sbjct 482287 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 482346 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 ||||| || || |||| |||| || ||||| || Sbjct 482347 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 149 bits (164), Expect = 7e-31 Identities = 269/391 (69%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 52922 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 52981 ||||| || | ||| | ||| ||| ||||| |||||||| || | || ||||||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 52982 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 53041 || | || |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 53042 GGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCA 53098 |||| ||| | ||||||| || || | | | || || |||||| ||||| Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 53099 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 53158 || | ||| | | || || || ||| || | | | ||| ||||| || ||||| ||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 53159 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 53218 |||||||| | || | || |||||||| || || || || || || | || || || Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 53219 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 53278 || ||||||||||| || || || || || ||||| || || | || ||| ||| | | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 53279 AGACCGTATGTTCTG--ATTTTATCTTTTAG 53307 | || |||||||| |||||| |||| || Sbjct 481019 ACGCC--ATGTTCTGCAATTTTAGCTTTCAG 481047 Score = 104 bits (114), Expect = 3e-17 Identities = 215/319 (67%), Gaps = 6/319 (2%) Strand=Plus/Plus Query 53549 ATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTA 53608 ||||| || || || || ||| | || || |||| |||||||| || || || ||||| Sbjct 481443 ATACCAATGGGCCTGTGCCTCGTGTTGGACCTTTCTGCTTCTGGGATGGGGTAGTAATTT 481502 Query 53609 ATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGA 53668 | || |||||||||| | ||||| | ||||| || || ||||| ||||| | Sbjct 481503 AGGTCAATAATTTTATCCAAATTTCTTGTTGTGACTTTTACGACTTCCTTAAGTTTTGCA 481562 Query 53669 AAATCAAA-----TTGTCCATCTATT-ACAAACATGTTCAATGCAATAGATGCCAGATTA 53722 ||||| | || | | |||| |||||||| || | ||||||||||| | ||| Sbjct 481563 AAATCGTACGTTTTTTTACTGGTATTTACAAACATATTAACGGCAATAGATGCTAAATTG 481622 Query 53723 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 53782 || |||||||| || | | | | ||| || | | || ||||| | |||||| | Sbjct 481623 CACACGGCTACTTCGTCTGGAGAAGAATACTGCACAACTTCCGTGCATAAATTACTGCTT 481682 Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842 |||| || || | ||||||||||| || ||||| ||| || || | ||| Sbjct 481683 CTGATAGTACCAAGGTTTTGTTGATTGGATTTGCGATTACAGTGATCTTTGTATAACATG 481742 Query 53843 AATGGCGTACCAGTTTCAA 53861 | || || |||||||||| Sbjct 481743 TAAGGGGTTCCAGTTTCAA 481761 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 54770 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 54829 || |||| ||| || ||||||||||||| ||| ||||| |||||||| || |||||||| Sbjct 482905 CTGAATACTTTCTTGGTTTCTTTGTGTAAATTGGATACTGCTATTCTGGCTGCTAGAATA 482964 Query 54830 GCATAATCCG 54839 |||||||||| Sbjct 482965 GCATAATCCG 482974 >seq1332 Length=421543 Score = 122 bits (134), Expect = 1e-22 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 || || || ||||||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 53147 ACTA-CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 53205 || | | |||| |||||| ||||| || | | ||||||||||||||| || || || || Sbjct 277183 ACAATCATGAA-TTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTC 277125 Query 53206 CACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 53259 ||| || ||||| |||||||| || ||||| || || || |||||||| ||||| Sbjct 277124 CACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 53690 ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 53749 |||||||| || | ||||| ||||| | |||||| || ||||| ||||| | | | Sbjct 276467 ACAAACATATTAACAGCAATGGATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAG 276408 Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 |||||||| || |||||||| | |||||| | || || ||||| | |||||||||||| Sbjct 276407 TATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTT 276348 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGAT 53869 || || || | ||| ||||| || || | || || |||||||||| || | | Sbjct 276347 GATTTAAGATTGCAGGGATCTTTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCT 276288 Query 53870 TCTATAATCGCTTTCCA 53886 | || ||| || |||| Sbjct 276287 TTTAAAATTGCAGTCCA 276271 >seq4429 Length=4547816 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 24405 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 24464 || || ||||| | ||| |||||||| || ||||||||||||||||||| || || Sbjct 2612779 TAGGTGTCAATGAGAAGGGAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAG 2612720 Query 24465 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTT 24524 || ||||| || | |||||| || | ||| ||||| | || || || | | ||| Sbjct 2612719 CCATAGAAGCAACGAGCCTCAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTC 2612660 Query 24525 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 24568 ||||| || || || || ||| || || || ||||| ||||| Sbjct 2612659 TCATTGACAATACCATCTGAGGCAGCGAAGAATGCCAAAACATG 2612616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593685145493760