Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2005 100 2e-16 seq3620 89.7 4e-13 >seq2005 Length=1592806 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | ||||||||||| || || ||||||||| || ||| | | Sbjct 904816 AATGCAAATCTTTGTTAAAACATTGACTGGAAAGACCATTACCCTGGAGGTTGAAGCTTC 904875 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | || || || || |||||||| | || || || Sbjct 904876 AGACACAATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCTGACCA 904935 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||| | ||||||||||| |||||||| ||||||||| ||| | | |||||||| Sbjct 904936 ACAGCGTCTTATCTTTGCTGGCAAACAGCTGGAAGATGGACGTACTCTTTCTGATTACAA 904995 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||| || || |||||||||||| |||| | || || ||||||| Sbjct 904996 TATTCAAAAAGAGTCTACTCTTCACTTGGTCCTGCGTCTAAGAGGAGG 905043 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || || | ||||| ||||| ||||||||||| || ||| ||| || Sbjct 904586 AAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCC 904645 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 |||| || | | || | || ||||| || ||||| || | || |||| Sbjct 904646 TCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGAT 904705 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || | ||||||||||| || |||||| | |||||| ||| | | || ||| Sbjct 904706 CAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTAC 904765 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||||||||| || |||||||| | || || || | || ||||| Sbjct 904766 AATATTCAGAAGGAGTCAACTCTTCATCTAGTCTTGCGCCTCCGTGGAGG 904815 >seq3620 Length=288302 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || ||||| ||||| ||||| ||| || || | | Sbjct 89352 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCATCC 89411 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | || | ||| || || ||||| ||||| | ||| ||| || Sbjct 89412 GACACGATCGAGAATGTCAAGACCAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCAG 89471 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | ||||| || ||||| || || |||||| ||| || |||| |||||| Sbjct 89472 CAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGTACTCTGTCCGACTACAAT 89531 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| || |||||||| |||||| |||| || || || ||||||| Sbjct 89532 ATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGAGG 89578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || ||||| ||||||||||| || ||| || || | Sbjct 91632 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91691 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | || | ||| ||||| || ||||| || | || ||| || Sbjct 91692 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 91751 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || | | |||||||| || |||||| |||||||| || | || | |||| |||| Sbjct 91752 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCT--CCGACTACA 91809 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||| || |||||||| || ||| |||| ||||| Sbjct 91810 ATATTCAAAAAGAATCTACACTCCACTTGGTCTTACG 91846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428310357665360