Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq2005 105 5e-18 seq3620 98.7 8e-16 >seq2005 Length=1592806 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | ||||||||||| || || ||||||||| || ||| | | Sbjct 904816 AATGCAAATCTTTGTTAAAACATTGACTGGAAAGACCATTACCCTGGAGGTTGAAGCTTC 904875 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| || | | || |||| || || || |||||||| | || || || Sbjct 904876 AGACACAATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCTGACCA 904935 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| | ||||||||||| |||||||| |||||||| ||| | | |||||||| Sbjct 904936 ACAGCGTCTTATCTTTGCTGGCAAACAGCTGGAAGATGGACGTACTCTTTCTGATTACAA 904995 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||| || |||||||||||| |||| | || || ||||||| Sbjct 904996 TATTCAAAAAGAGTCTACTCTTCACTTGGTCCTGCGTCTAAGAGGAGG 905043 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || ||||| || || | ||||| ||||| ||||||||||| || ||| ||| || Sbjct 904586 AAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCC 904645 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 |||| || | | || |||| ||||| || ||||| || | || |||| Sbjct 904646 TCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGAT 904705 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || || | ||||||||||| || |||||||| |||||| ||| | | || ||| Sbjct 904706 CAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTAC 904765 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| || |||||||| | || || || | || ||||| Sbjct 904766 AATATTCAGAAGGAGTCAACTCTTCATCTAGTCTTGCGCCTCCGTGGAGG 904815 >seq3620 Length=288302 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || ||||| ||||||||||| || ||| || || | Sbjct 91632 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91691 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || ||||| ||||| || ||||| || | || ||| || Sbjct 91692 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 91751 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || | | |||||||| || ||||||||||||||| || | || | |||| |||| Sbjct 91752 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCT--CCGACTACA 91809 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||||||||| |||||||| || ||| |||| ||||| Sbjct 91810 ATATTCAAAAAGAATCTACACTCCACTTGGTCTTACG 91846 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || ||||| ||||| ||||| ||| || || | | Sbjct 89352 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCATCC 89411 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || ||||| || || ||||| ||||| | ||| ||| || Sbjct 89412 GACACGATCGAGAATGTCAAGACCAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCAG 89471 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || | ||||| || ||||| || | |||||| ||| || |||| |||||| Sbjct 89472 CAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGTACTCTGTCCGACTACAAT 89531 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| |||||||| |||||| |||| || || || ||||||| Sbjct 89532 ATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGAGG 89578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 ||| ||||| || ||| | ||||| |||| || || ||||| ||| ||| || | Sbjct 89120 AAACATGCAGATTTTCGTGAAAACCCTGACTGGGAAGACCATCACCCTCGAGGTTGAGGC 89179 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | || || | | || ||||| || || ||||| ||||| | ||| ||| Sbjct 89180 TTCCGACACTATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCCCCAGA 89239 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 || || || | ||||| || ||||| || | |||||| ||| || |||| || Sbjct 89240 CCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGTACTCTGTCCGACTA 89299 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||| |||||||| |||||| |||| || || || |||| || Sbjct 89300 CAATATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGTGG 89350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410772207649568