Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3620 116 4e-21 seq2005 111 2e-19 seq3729 102 9e-17 seq704 98.7 1e-15 seq4679 93.3 5e-14 seq3622 91.5 2e-13 seq948 89.7 6e-13 >seq3620 Length=288302 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| |||||||| ||||| || | ||| || |||||||||||||| || | | Sbjct 89578 CCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89519 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || |||||||| |||||||| || | | ||||||||| | || Sbjct 89518 AGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89459 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||| || ||| || |||| || | | ||||||| | || || Sbjct 89458 ATGCCTTCCTTATCTTGGATCTTGGTCTTGACATTCTCGATCGTGTCGGATGCCTCAACC 89399 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || | ||||| || ||||| ||||| Sbjct 89398 TCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 89352 Score = 105 bits (116), Expect = 8e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| |||||||| ||||| || | ||| || |||||||||||||| || | | Sbjct 89350 CCACCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89291 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || |||||||| |||||||| || | | ||||||||| | || Sbjct 89290 AGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89231 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||| || ||| || |||| || | | |||||| | || || Sbjct 89230 ATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACC 89171 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 |||| |||||||| || || || || || || || || || ||||| ||| Sbjct 89170 TCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTTT 89120 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| |||||||||| ||| || ||||| || || || || | || || ||| | Sbjct 90022 CGCAATACCAAATGCAGCGTGGATTCTTTTTGTATGTTATAGTCTGACAATGTGCGCCCA 89963 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || |||| || || |||||||| || | | ||||||||| | || | | ||| ||| Sbjct 89962 TCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCTTTG 89903 Query 43089 TCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| |||| | || | | | | ||||||| | || || || | ||||| Sbjct 89902 TCC-TGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGACTTCAAGTGTGAT 89844 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||| ||||| || ||||| || ||||| ||||| Sbjct 89843 GGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89808 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || || ||||||| |||||| || | || || |||||||| || ||||| Sbjct 90227 CTCTTTCTGTATGTTATAATCAGACAGAGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAA 90168 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||| | || | | |||||||| ||| || || | | Sbjct 90167 AATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTT 90108 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || ||| || |||| || || || || || || || |||||||| Sbjct 90107 CTCGATGGTGTCGGACGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTAC 90048 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 90047 GAAGATTTGCAT 90036 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| |||| || || || | || || || ||||||||||| || Sbjct 89770 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAA 89711 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || || | |||||| || | || | | || |||| | ||| | || | |||| | Sbjct 89710 ATCAGCCTCTGCTGATCTGGGGGAATACCTTCTTTGT-CTTGAATCTTAGCCTTGACATT 89652 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||| || | ||| || || | || || |||||||| || |||||||| || Sbjct 89651 CTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAAC 89592 Query 43172 AAAGATTTGCAT 43183 ||| |||||||| Sbjct 89591 AAAAATTTGCAT 89580 >seq2005 Length=1592806 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | |||||| |||||||| || ||| ||||||||| || ||||| || | Sbjct 906412 TCCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTGA 906353 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || ||||| ||||| || || ||||| ||||||||||| | || Sbjct 906352 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906293 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || ||||| ||| ||| |||| | ||||| | | | |||||| | ||| | Sbjct 906292 GATGCCTTCCTTATCC-TGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906234 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | || |||||||| || |||| || || || || || |||||| Sbjct 906233 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCATT 906184 Score = 105 bits (116), Expect = 8e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | |||| ||| | ||| ||| |||||||| ||||| || | Sbjct 906184 TCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906125 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || ||||| ||||| || || ||||| ||||||||||| | || Sbjct 906124 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906065 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || ||||| ||| ||| |||| | ||||| | | | |||||| | ||| | Sbjct 906064 GATGCCTTCCTTATCC-TGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906006 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | || |||||||| || |||| || || || || ||||||||| Sbjct 906005 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCATT 905956 Score = 104 bits (114), Expect = 3e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | ||||| || | ||| | || |||||| ||||||||||| |||| Sbjct 904816 TCCTCCACGGAGGCGCAAGACTAGATGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGA 904757 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| || | || |||| || |||||||| || || || |||||||| || | || Sbjct 904756 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGG 904697 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||| |||||| |||||| ||||| | | | ||||| | ||||| Sbjct 904696 AATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCAC 904637 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGAA 43195 || | |||||||||||||| || | || || |||||||| ||||| || | || ||| Sbjct 904636 TTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTTGAAGCTGAA 904577 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||||| ||||| ||||| || | || ||| ||||||||||||||||||| Sbjct 905044 TCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAGA 904985 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| || | || || ||||| || ||||| || || || ||||| ||||| | || Sbjct 904984 AAGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGG 904925 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | || ||||| ||| || ||||| | | | ||||| | ||| || Sbjct 904924 AATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTCTGAAGCTTCAAC 904865 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | || ||||| || || || | || || ||||||||||||||| Sbjct 904864 CTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCATT 904816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || |||||||||| ||||| | |||| || |||||||| ||||| || Sbjct 905235 TCTTTCTGGATGTTGTAATCAGAAAGAGTTCTTCCGTCTTCAAGCTGCTTGCCAGCAAAA 905176 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | ||| |||||| |||||| |||| | Sbjct 905175 ATCAGACGCTGCTGGTCTGGAGGGATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTT 905116 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| | ||| || || | |||||||| || || || | ||||| ||| Sbjct 905115 TCAATTGTGTCTGAAGCTTCAACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACA 905056 Query 43173 AAGATTTGCATT 43184 |||||||||||| Sbjct 905055 AAGATTTGCATT 905044 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| |||| || || ||| |||| |||| || |||||||| || Sbjct 905920 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGCCCGTCTTCTAATTGTTTACCAGCAAA 905861 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | || |||||| ||| |||| | ||| | Sbjct 905860 GATAAGACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCC-TGAATTTTGGCTTTAACAT 905802 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| | || || || | || ||||| ||||| || || || || | Sbjct 905801 TTTCAATGGTGTCGGAGGCCTCTACTTCCAGAGTAATGGTCTTGCCAGTCAGAGTTTTGA 905742 Query 43171 CAAAGATTTGCATT 43184 | || ||||||||| Sbjct 905741 CGAAAATTTGCATT 905728 >seq3729 Length=1721049 Score = 102 bits (112), Expect = 9e-17 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| |||||||| |||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1705063 CTCCCCGGCGGGGAATCGNACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1705122 Query 60126 TACTACCGAGGAT 60138 ||||||||||||| Sbjct 1705123 TACTACCGAGGAT 1705135 >seq704 Length=1071093 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 60052 TTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111 |||| ||||| ||||| | || ||||||||||||| ||||||||||||||||||||| Sbjct 871306 TTATAAAAAAAATTCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 871247 Query 60112 CATACTCACCACTATACTACCGAGGAT 60138 ||||| ||||||||||||| || ||| Sbjct 871246 GATACTGACCACTATACTACTGAAGAT 871220 >seq4679 Length=2976862 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||| | || ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2762330 AAAAATAATCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2762271 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||| || || Sbjct 2762270 TGACCACTATACTACTGAAGA 2762250 >seq3622 Length=3730247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 84/102 (82%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 60042 AAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAA-CCCTGGTCTCCCGCG 60100 || ||||| ||| ||||| | ||||| || |||||||||| ||||||||||||||| Sbjct 1647789 AATTTAAC--TTAAAAAAAAATCTCTCCA--GCGGGGAATCGAAACCCTGGTCTCCCGCG 1647844 Query 60101 TGACAGGCGGACATACTCACCACTATACTACCGAGGA-TTGA 60141 |||||||||| ||||| ||||||||||||| || || |||| Sbjct 1647845 TGACAGGCGGGGATACTGACCACTATACTACTGAAGACTTGA 1647886 >seq948 Length=5643655 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACC 60132 || ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| Sbjct 696481 GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACT 696540 Query 60133 GAGGATT 60139 || |||| Sbjct 696541 GAAGATT 696547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571782490399360