Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3620 102 6e-17 seq2005 95.1 1e-14 >seq3620 Length=288302 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| || ||||| || || ||| ||| |||||||||||||| ||| ||| || | Sbjct 90479 TCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGTCC 90420 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || || ||||| ||||| ||||| || || ||||| || || ||||| | ||| ||||| Sbjct 90419 ATCTTCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTCCTT 90360 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 || ||||| ||| || | | | |||| |||| ||||| | ||| || Sbjct 90359 ATCTTGGATTTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTGAT 90300 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| |||| ||||| || ||||| ||||| Sbjct 90299 GGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||| ||||| || || ||| ||||| ||||| || || ||| ||| | || || Sbjct 90245 TACTAAGTGAAGAGTAGACTCTTTCTGTATGTTATAATCAGACAGAGTGCGTCCATCCTC 90186 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || ||||||||||| ||||| ||||| ||||| || || | ||| |||||||| Sbjct 90185 AAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTG 90126 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | | |||| | || || || | |||||| ||||| Sbjct 90125 GATCTTAGCCTTTACGTTCTCGATGGTGTCGGACGCTTCAACTTCGAGGGTAATAGTCTT 90066 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||||||||| Sbjct 90065 ACCAGTCAGAGTCTTTACGAAGATTTGCAT 90036 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| | || |||||||| || || || || ||||| ||||||||| | Sbjct 89350 CCACCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89291 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || || || || || ||||| ||||||| ||| ||||| || || Sbjct 89290 AGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89231 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| || || || ||| || | | | |||| | |||| ||| Sbjct 89230 ATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACC 89171 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || | ||| || ||||| || ||||| || ||||| || || |||||||| Sbjct 89170 TCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTT 89121 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| || | | ||| |||||||| || || || || ||||| ||||||||| Sbjct 91858 CCACCCCTAAGACGTAAGACCAAGTGGAGTGTAGATTCTTTTTGAATATTGTAGTCGGAG 91799 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || |||| |||||||||||| || || || ||||| ||||| ||||| Sbjct 91798 AGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGAGGG 91739 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| |||||| ||||| ||| || | | | || |||| || Sbjct 91738 ATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGACT 91679 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || || || ||||| |||| ||||| || ||||| ||||| Sbjct 91678 TCAAGTGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 91632 >seq2005 Length=1592806 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||||||||| || || |||| || | |||||| || || || Sbjct 905920 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGCCCGTCTTCTAATTGTTTACCAGCAAA 905861 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| ||||| | || || |||||| |||||| ||||| Sbjct 905860 GATAAGACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATT 905801 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| |||| || |||| ||||| |||||||| |||||||| || || Sbjct 905800 TTCAATGGTGTCGGAGGCCTCTACTTCCAGAGTAATGGTCTTGCCAGTCAGAGTTTTGAC 905741 Query 45325 AAAGATTTGCAT 45336 || |||||||| Sbjct 905740 GAAAATTTGCAT 905729 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 45180 CGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCT 45239 |||| || || || || || || || |||| ||||| ||||| ||||| | |||||| | Sbjct 905201 CGTCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGGATACCCTCTT 905142 Query 45240 TGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAA 45299 ||||| ||||| ||| || | | |||| | | || ||||||| ||| | Sbjct 905141 TGTCCTGGATTTTGGCCTTGACATTTTCAATTGTGTCTGAAGCTTCAACCTCCAAGGTGA 905082 Query 45300 TCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || |||| |||||| |||||||||||||| Sbjct 905081 TGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 905045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395051548823152