Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2005 109 4e-19 seq3620 100 2e-16 >seq2005 Length=1592806 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||| || | || ||||||||||||||||| |||||||| || | Sbjct 905728 TCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGATGTTGTAATCAGA 905669 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| | | |||||||| |||||| || ||| | || || | |||||| || || Sbjct 905668 CAGGGTTCTGCCATCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGG 905609 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | |||||| || || ||| | | |||| ||| | | | | ||| ||| | ||| Sbjct 905608 GATGCCTTCTTTGTCTTGAATCT-TGGCTTTGACATTTTCGATAGTATCAGAAGCCTCTA 905550 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| | || || ||||| ||||| |||||||||||||| Sbjct 905549 CTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905501 Score = 105 bits (116), Expect = 5e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | |||||||| || || || || |||||||||||||||||||| | Sbjct 906184 TCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906125 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | | ||| |||| ||||| || ||| |||| || | || || || || Sbjct 906124 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906065 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | |||||||||||| ||||| | |||| ||| | | | | |||||| | || Sbjct 906064 GATGCCTTCCTTATCCTGAATTT-TAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906006 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | ||| ||| |||| ||||| || ||||| || |||||||||||| Sbjct 906005 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCATT 905956 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | ||| | || |||| |||||| || || ||||||||||| ||||| || | Sbjct 905044 TCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAGA 904985 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||||| |||||||| ||| ||||||| | ||||| || || Sbjct 904984 AAGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGG 904925 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| || || || | | || ||||| | | ||| ||||| | || Sbjct 904924 AATTCCTTCTTTGTCTTGGATCT-TAGCTTTGACATTTTCAATTGTGTCTGAAGCTTCAA 904866 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| | || || ||||||||||| ||||| ||||||||| Sbjct 904865 CCTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCATT 904816 >seq3620 Length=288302 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTC-TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156 ||| |||| || | |||| |||| ||| ||||| |||||||||||||| |||||||||| Sbjct 91859 TCCACCCCTAAGACGTAAG-ACCAAGTGGAGTGTAGATTCTTTTTGAATATTGTAGTCGG 91801 Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216 | || || ||||||||||||||| || ||| |||| | | || || || | Sbjct 91800 AGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGAG 91741 Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | | || || || || |||| |||||| | | | | || ||| || |||| Sbjct 91740 GGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGA 91681 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||||| ||||||| ||||| || || || || || ||||| Sbjct 91680 CTTCAAGTGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 91632 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| |||||| | ||||||||| ||||| ||||||||||||||||| | | Sbjct 89806 CCACCGCGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGAC 89747 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||| | ||| || || ||| | || || || || ||||| ||| Sbjct 89746 AATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGA 89687 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || ||| | |||||| | ||| || ||| | ||| | Sbjct 89686 ATACCTTCTTTGTCTTGAATCTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTCGACT 89627 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || ||||||| || | || || |||||||||||||| Sbjct 89626 TCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89580 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||||||||| |||||||||||||| |||||||||| || || | |||||| Sbjct 89560 ACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCTTCG 89501 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC-GGC 18235 | || ||||| || |||| | || || || || ||| | |||||||||||| | Sbjct 89500 AGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGG 89441 Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 | ||| | |||||| | | | ||||| | ||| |||| ||||||| | || Sbjct 89440 ATCTTGGT-CTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTGATGGTCTT 89382 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||| || || || || || ||||| Sbjct 89381 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 89352 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||||||||| |||||||||||||| |||||||||| || || | |||||| Sbjct 89332 ACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCTTCG 89273 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || ||||| || |||| | || || || || ||| | |||||||||||| Sbjct 89272 AGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGG 89213 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | | | |||||| | ||| || | ||||||| | || Sbjct 89212 ATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACCTCGAGGGTGATGGTCTTC 89153 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 || |||| ||||| || ||||| ||||| ||| Sbjct 89152 CCAGTCAGGGTTTTCACGAAAATCTGCATGTTT 89120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379321290571440