Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4429 107 4e-18 seq3545 104 5e-17 >seq4429 Length=4547816 Score = 107 bits (118), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || || |||| | | ||||||| |||||||| || |||||||| || || ||| ||| Sbjct 2612970 TTTGCCGAACGAGTGATTGCCTTCGCTGCAGTCGAGGGAATCTTTTTCAGCGGTAGTTTC 2613029 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || ||||||||||| | ||||| | ||| || ||||||| || |||| | |||||| Sbjct 2613030 GCTGCCATTTTCTGGCTGAAGAAGCGTGGTCTTATGCCTGGACTTACCTTCAGCAATGAA 2613089 Query 102023 TTCATTTCTAGGGACGA 102039 |||||||||||||||| Sbjct 2613090 CTCATTTCTAGGGACGA 2613106 >seq3545 Length=1895843 Score = 104 bits (114), Expect = 5e-17 Identities = 184/263 (70%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACT-CTCGTGG 35281 |||| | || || |||||||| || | ||| | | || || || || | ||| ||| Sbjct 1749807 TTCCTCTGCTGACAACCAAGAACGTTCTTTGGCGTGCTGTGGTCGAGGAGTTGCTC-TGG 1749865 Query 35282 TTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAAC 35341 ||||| | ||| || |||| ||||| | ||| | || || | ||||||||| Sbjct 1749866 TTCATAAAGGGATCCACTAACGCAAAAGAGCTTGCCGACAAAGGCGTAAAAATCTGGAAC 1749925 Query 35342 GCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGAT 35401 || ||| | ||||| ||||||||||| | ||||| |||||||| |||||| || Sbjct 1749926 GCCAATAGTTCGCGTGAATTTTTGGATTCCTGCGGGTTCACCGATAGAGAAGAGGGCGAC 1749985 Query 35402 TTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTC- 35460 ||||| || ||||| || ||||| ||| | ||||| || || |||||| | | | | Sbjct 1749986 TTGGGCCCTGTATATGGCTTCCAGTGGAGGCATTTCGGAGCCAAATATG-TCAATATGCA 1750044 Query 35461 TTCCGATTATACTGGAAAGGGTA 35483 | | ||||| |||||| |||||| Sbjct 1750045 TACGGATTACACTGGACAGGGTA 1750067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989521720530960