Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4696 179 5e-40 seq1332 118 1e-21 seq4429 96.9 4e-15 >seq4696 Length=9412112 Score = 179 bits (198), Expect = 5e-40 Identities = 317/457 (69%), Gaps = 4/457 (1%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || || || ||||||||||||| |||| ||||||||||| |||||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || | | ||| || |||| ||||| || | || || ||||| | ||| ||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 482046 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | | Sbjct 482047 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 482106 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 || |||| ||||||||||||||| || ||||| | ||||||| | |||||||| || Sbjct 482107 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 482166 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||||| | ||| | || |||||||| || ||||| | ||| |||| | ||| || || Sbjct 482167 TTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 482226 Query 63488 TATACCATTGGTACCGGAGATATAGCCT-CCACTGGCACGAATATTACTAATTGATAGAC 63546 || || || || || || || | | | ||| |||| | ||| | || | || Sbjct 482227 TACGCCGTTTGTGCCAGAAAT-TCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAAC 482285 Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606 | || || || || ||| || ||| || |||| || | || ||||| || |||| Sbjct 482286 CAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTT 482345 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 | || || || || |||| |||| || ||||| || Sbjct 482346 CAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 152 bits (168), Expect = 6e-32 Identities = 270/391 (69%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 62160 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62219 ||||| || | ||| | ||| ||| ||||| |||||||| || | || ||||||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 62220 TTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62279 || | || |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 62280 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCA 62336 |||| ||| | ||||||| || || | | | || || |||||| ||||| Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 62337 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAAT 62396 || | ||| | | || || || ||| || | | | ||| || || || ||||||||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 62397 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62456 |||||||| | || | || |||||||| || || || || || || | ||| || || Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 62457 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62516 || ||||||||||| || || || || || ||||| || || | || ||| ||| | | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 62517 AGACCGTATGTTCTG--ATTTTATCTTTTAG 62545 | || |||||||| |||||| |||| || Sbjct 481019 ACGCC--ATGTTCTGCAATTTTAGCTTTCAG 481047 Score = 120 bits (132), Expect = 4e-22 Identities = 190/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 63642 CTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63701 || |||||||| ||||| ||| | || ||| | || || || ||||| ||||| Sbjct 482454 CTCGACATTTGCTGACGTAAAGTACAAGCCGAAAAAAGCGTTGGCGATGCGTGGGTAAAA 482513 Query 63702 CATTTTTCAGAAAG-TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63760 | ||||| | ||| ||||| ||||||||| || || | ||| || ||||| Sbjct 482514 TAACGCTCAGACATATAG-TTGTAAGTCTCAATAACTTTCTCGAGATCATCTTTGTGAAT 482572 Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTT 63820 |||| || || | ||| | ||||||||| || | |||||| | || || || || || Sbjct 482573 AGCTACAGCAACTCTCATGAGCATGTGCTGTGGACGTTCAACTACCTTTTTATTGATCTT 482632 Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63880 || ||| || | |||||||||| ||||| ||||| || |||||| ||| |||| || Sbjct 482633 CATCAAATAACTTCTTTCCAAAGTCTTAAATCCAAAGTAATTGTATCCAAAATCTCTATC 482692 Query 63881 GTAAATAATAACCGAATTGAGCTTATCCTT 63910 || || || | ||||| ||||||||||| Sbjct 482693 ATAGATGATGGCAGAATTCAGCTTATCCTT 482722 >seq1332 Length=421543 Score = 118 bits (130), Expect = 1e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 62325 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTA 62384 || || || ||||||| ||| | ||||||| |||||| | | | | ||| || ||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 62385 ACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62444 || | ||||||||| ||||| || | | ||||||||||||||| || || || ||| Sbjct 277183 ACAATCATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277124 Query 62445 ACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62497 || || ||||| |||||||| || ||||| || || || |||||||| ||||| Sbjct 277123 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62928 ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA 62987 |||||||| || | |||| ||||| | |||||| || ||||| ||||| | | | Sbjct 276467 ACAAACATATTAACAGCAATGGATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAG 276408 Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 63047 |||||||| || |||||||| | |||||| | || |||||||| | |||||||||||| Sbjct 276407 TATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTT 276348 Query 63048 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63107 || || || | ||| ||||| || || | ||||| |||||||||| || | | Sbjct 276347 GATTTAAGATTGCAGGGATCTTTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCT 276288 Query 63108 TCTATAATCGCTTTCCA 63124 | || ||| || |||| Sbjct 276287 TTTAAAATTGCAGTCCA 276271 >seq4429 Length=4547816 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 33873 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33932 |||||||| || ||||||||||||||||||| ||| || || ||||| || | |||||| Sbjct 2612758 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAACGAGCCTCA 2612699 Query 33933 GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992 || | ||||||||| | || || || | | ||| ||||| || || ||||| | Sbjct 2612698 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCTGAG 2612639 Query 33993 GCTGCAAAAAACGCCAATACATG 34015 || || || || ||||| ||||| Sbjct 2612638 GCAGCGAAGAATGCCAAAACATG 2612616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629778929199360